RNA–Protein interactions for RNA: ENST00000566515.5

CCNDBP1-208, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-208ENST00000566515 IBTKQ9P2D0 1353 aaPredicted RBP26.74■■□□□ 1.87
CCNDBP1-208ENST00000566515 F6X3S4 739 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 KCNA3P22001 575 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 PDE6BP35913 854 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 TRIM28Q13263 835 aaKnown RBP26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 PELP1Q8IZL8 1130 aaKnown RBP26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 ABCC12Q96J65 1359 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 C2CD5Q86YS7 1000 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 SYNE4Q8N205 404 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 DNAAF4Q8WXU2 420 aa26.72■■□□□ 1.87
CCNDBP1-208ENST00000566515 BRCA1P38398 1863 aaKnown RBP26.71■■□□□ 1.87
CCNDBP1-208ENST00000566515 IGKV5-2P06315 115 aa26.71■■□□□ 1.87
CCNDBP1-208ENST00000566515 NEXNQ0ZGT2 675 aa26.71■■□□□ 1.87
CCNDBP1-208ENST00000566515 COL11A2P13942 1736 aaPredicted RBP26.71■■□□□ 1.87
CCNDBP1-208ENST00000566515 TNRC6CQ9HCJ0 1690 aaKnown RBP26.7■■□□□ 1.86
CCNDBP1-208ENST00000566515 H0YIN7 160 aa26.69■■□□□ 1.86
CCNDBP1-208ENST00000566515 CWF19L2Q2TBE0 894 aaKnown RBP26.69■■□□□ 1.86
CCNDBP1-208ENST00000566515 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
CCNDBP1-208ENST00000566515 RTL5Q5HYW3 569 aaPredicted RBP26.68■■□□□ 1.86
CCNDBP1-208ENST00000566515 CCDC191Q8NCU4 936 aa26.68■■□□□ 1.86
CCNDBP1-208ENST00000566515 FAM89AQ96GI7 184 aa26.68■■□□□ 1.86
CCNDBP1-208ENST00000566515 GPR162Q16538 588 aa26.68■■□□□ 1.86
CCNDBP1-208ENST00000566515 CWC25Q9NXE8 425 aaPredicted RBP26.68■■□□□ 1.86
CCNDBP1-208ENST00000566515 SH3TC1Q8TE82 1336 aa26.67■■□□□ 1.86
CCNDBP1-208ENST00000566515 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
CCNDBP1-208ENST00000566515 NEURL1BA8MQ27 555 aa26.66■■□□□ 1.86
CCNDBP1-208ENST00000566515 YBX3P16989 372 aaKnown RBP eCLIP26.66■■□□□ 1.861e-6■□□□□ 9
CCNDBP1-208ENST00000566515 PIM2Q9P1W9 311 aa26.66■■□□□ 1.86
CCNDBP1-208ENST00000566515 PTPRCP08575 1304 aa26.66■■□□□ 1.86
CCNDBP1-208ENST00000566515 HCLS1P14317 486 aaPredicted RBP26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 SLC4A10Q6U841 1118 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 JARID2Q92833 1246 aaPredicted RBP26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 KLRG2A4D1S0 409 aaPredicted RBP26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 DCAF8L1A6NGE4 600 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 BCAR3O75815 825 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 SRGNP10124 158 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 SLC10A5Q5PT55 438 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 C3orf67Q6ZVT6 689 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 LINS1Q8NG48 757 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 ZNF622Q969S3 477 aaKnown RBP eCLIP26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 NOB1Q9ULX3 412 aaKnown RBP26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 PDZRN3Q9UPQ7 1066 aa26.65■■□□□ 1.86
CCNDBP1-208ENST00000566515 BRPF1P55201 1214 aaPredicted RBP26.64■■□□□ 1.85
CCNDBP1-208ENST00000566515 ZBTB38Q8NAP3 1195 aaPredicted RBP26.64■■□□□ 1.85
CCNDBP1-208ENST00000566515 BCS1LQ9Y276 419 aa26.64■■□□□ 1.85
CCNDBP1-208ENST00000566515 DDX60Q8IY21 1712 aaKnown RBP26.64■■□□□ 1.85
CCNDBP1-208ENST00000566515 UTRNP46939 3433 aa26.64■■□□□ 1.85
CCNDBP1-208ENST00000566515 RIC1Q4ADV7 1423 aa26.63■■□□□ 1.85
CCNDBP1-208ENST00000566515 LAMB2P55268 1798 aa26.63■■□□□ 1.85
CCNDBP1-208ENST00000566515 BEND3Q5T5X7 828 aa26.63■■□□□ 1.85
CCNDBP1-208ENST00000566515 CACNA1SQ13698 1873 aa26.63■■□□□ 1.85
CCNDBP1-208ENST00000566515 PCCAP05165 728 aaPredicted RBP26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 DALRD3Q5D0E6 543 aaKnown RBP26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 MASTLQ96GX5 879 aa26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 NLRP3Q96P20 1036 aa26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 IRS4O14654 1257 aaPredicted RBP26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 GCKRQ14397 625 aa26.61■■□□□ 1.85
CCNDBP1-208ENST00000566515 NPR1P16066 1061 aa26.6■■□□□ 1.85
CCNDBP1-208ENST00000566515 CRY2Q49AN0 593 aa26.6■■□□□ 1.85
CCNDBP1-208ENST00000566515 STYK1Q6J9G0 422 aa26.6■■□□□ 1.85
CCNDBP1-208ENST00000566515 TTLL6Q8N841 843 aa26.6■■□□□ 1.85
CCNDBP1-208ENST00000566515 ARFGEF1Q9Y6D6 1849 aa26.59■■□□□ 1.85
CCNDBP1-208ENST00000566515 KIF16BQ96L93 1317 aa26.58■■□□□ 1.85
CCNDBP1-208ENST00000566515 RPGRQ92834 1020 aaKnown RBP26.57■■□□□ 1.84
CCNDBP1-208ENST00000566515 FRAT1Q92837 279 aaPredicted RBP26.57■■□□□ 1.84
CCNDBP1-208ENST00000566515 SRCIN1Q9C0H9 1055 aa26.57■■□□□ 1.84
CCNDBP1-208ENST00000566515 SLX4Q8IY92 1834 aa26.57■■□□□ 1.84
CCNDBP1-208ENST00000566515 UBE3BQ7Z3V4 1068 aa26.57■■□□□ 1.84
CCNDBP1-208ENST00000566515 H7C1W4 665 aa26.56■■□□□ 1.84
CCNDBP1-208ENST00000566515 CNKSR1Q969H4 720 aa26.56■■□□□ 1.84
CCNDBP1-208ENST00000566515 API5Q9BZZ5 524 aaKnown RBP26.55■■□□□ 1.84
CCNDBP1-208ENST00000566515 GRIN3BO60391 1043 aa26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 ALDH1L1O75891 902 aa26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 PRPF40BQ6NWY9 871 aaKnown RBP26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 CDHR2Q9BYE9 1310 aa26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 HOXA10P31260 410 aaPredicted RBP26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 ARHGAP45Q92619 1136 aa26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 RBM17Q96I25 401 aaKnown RBP26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 ZNF219Q9P2Y4 722 aaPredicted RBP26.54■■□□□ 1.84
CCNDBP1-208ENST00000566515 TAF1P21675 1872 aa26.53■■□□□ 1.84
CCNDBP1-208ENST00000566515 IPO8O15397 1037 aaKnown RBP26.53■■□□□ 1.84
CCNDBP1-208ENST00000566515 PDE8AO60658 829 aa26.52■■□□□ 1.84
CCNDBP1-208ENST00000566515 HSP90B1P14625 803 aaKnown RBP26.52■■□□□ 1.84
CCNDBP1-208ENST00000566515 ALDH1B1P30837 517 aa26.52■■□□□ 1.84
CCNDBP1-208ENST00000566515 CASP7P55210 303 aa26.52■■□□□ 1.84
CCNDBP1-208ENST00000566515 MYH3P11055 1940 aa26.51■■□□□ 1.84
CCNDBP1-208ENST00000566515 C9orf78Q9NZ63 289 aaPredicted RBP26.51■■□□□ 1.83
CCNDBP1-208ENST00000566515 TNNQ9UQP3 1299 aa26.51■■□□□ 1.83
CCNDBP1-208ENST00000566515 GRM8O00222 908 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 C21orf2O43822 256 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 TRIM27P14373 513 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 SF3B3Q15393 1217 aaKnown RBP26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 CRAMP1Q96RY5 1269 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 ATF7IPQ6VMQ6 1270 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 ARHGAP27Q6ZUM4 889 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
CCNDBP1-208ENST00000566515 DDX46Q7L014 1031 aaKnown RBP26.49■■□□□ 1.83
CCNDBP1-208ENST00000566515 CCDC85AQ96PX6 553 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms