RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
KARS-206ENST00000566249 TERTO14746 1132 aaKnown RBP9.95□□□□□ -0.82
KARS-206ENST00000566249 FZD6O60353 706 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 EPB42P16452 691 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 PODXL2Q9NZ53 605 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 PHF24Q9UPV7 400 aa9.95□□□□□ -0.82
KARS-206ENST00000566249 RTCBQ9Y3I0 505 aaKnown RBP9.95□□□□□ -0.82
KARS-206ENST00000566249 ABCC9O60706 1549 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 EFSO43281 561 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 NDUFB5O43674 189 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 MZF1P28698 734 aaPredicted RBP9.94□□□□□ -0.82
KARS-206ENST00000566249 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
KARS-206ENST00000566249 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 CMTR1Q8N1G2 835 aaKnown RBP9.94□□□□□ -0.82
KARS-206ENST00000566249 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 ATXN7L1Q9ULK2 861 aaPredicted RBP9.94□□□□□ -0.82
KARS-206ENST00000566249 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
KARS-206ENST00000566249 PDGFAP04085 211 aa9.93□□□□□ -0.82
KARS-206ENST00000566249 MAPK1P28482 360 aa9.93□□□□□ -0.82
KARS-206ENST00000566249 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
KARS-206ENST00000566249 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
KARS-206ENST00000566249 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
KARS-206ENST00000566249 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
KARS-206ENST00000566249 DCTN4Q9UJW0 460 aa9.93□□□□□ -0.82
KARS-206ENST00000566249 PCSK2P16519 638 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 CD33P20138 364 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 FGFR3P22607 806 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
KARS-206ENST00000566249 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 HCN2Q9UL51 889 aa9.92□□□□□ -0.82
KARS-206ENST00000566249 KCNQ4P56696 695 aa9.91□□□□□ -0.82
KARS-206ENST00000566249 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
KARS-206ENST00000566249 TTC16Q8NEE8 873 aa9.9□□□□□ -0.82
KARS-206ENST00000566249 ERBB4Q15303 1308 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 VSIG8P0DPA2 414 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 USP5P45974 858 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
KARS-206ENST00000566249 GRIN2CQ14957 1233 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 KCNMB2Q9Y691 235 aa9.89□□□□□ -0.83
KARS-206ENST00000566249 UBAP1LF5GYI3 381 aa9.88□□□□□ -0.83
KARS-206ENST00000566249 XYLBO75191 536 aa9.88□□□□□ -0.83
KARS-206ENST00000566249 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
KARS-206ENST00000566249 CTBSQ01459 385 aa9.88□□□□□ -0.83
KARS-206ENST00000566249 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
KARS-206ENST00000566249 RBCK1Q9BYM8 510 aa9.88□□□□□ -0.83
KARS-206ENST00000566249 FNDC3AQ9Y2H6 1198 aaKnown RBP9.88□□□□□ -0.83
KARS-206ENST00000566249 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
KARS-206ENST00000566249 GAS6Q14393 721 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 GJD3Q8N144 294 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 IRF7Q92985 503 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 GGNBP2Q9H3C7 697 aa9.87□□□□□ -0.83
KARS-206ENST00000566249 A6NHS1 94 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 MX2P20592 715 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 PDE3BQ13370 1112 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 CCINQ13939 588 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 FAM182BQ5T319 152 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 ZSCAN29Q8IWY8 852 aaPredicted RBP9.86□□□□□ -0.83
KARS-206ENST00000566249 SLC30A3Q99726 388 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 COL25A1Q9BXS0 654 aaPredicted RBP9.86□□□□□ -0.83
KARS-206ENST00000566249 C11orf16Q9NQ32 467 aa9.86□□□□□ -0.83
KARS-206ENST00000566249 CCDC9Q9Y3X0 531 aaKnown RBP9.86□□□□□ -0.83
KARS-206ENST00000566249 EGFRP00533 1210 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 BMP4P12644 408 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 TMC7Q7Z402 723 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 PNMA5Q96PV4 448 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 GSX2Q9BZM3 304 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 PRR12Q9ULL5 1215 aa9.85□□□□□ -0.83
KARS-206ENST00000566249 SASH3O75995 380 aa9.84□□□□□ -0.83
KARS-206ENST00000566249 EHHADHQ08426 723 aa9.84□□□□□ -0.83
KARS-206ENST00000566249 ZNF438Q7Z4V0 828 aa9.84□□□□□ -0.83
KARS-206ENST00000566249 RAB44Q7Z6P3 723 aaPredicted RBP9.84□□□□□ -0.83
KARS-206ENST00000566249 ZNF775Q96BV0 537 aaPredicted RBP9.84□□□□□ -0.83
KARS-206ENST00000566249 ASB16Q96NS5 453 aa9.84□□□□□ -0.83
KARS-206ENST00000566249 FAM129BQ96TA1 746 aa9.84□□□□□ -0.83
KARS-206ENST00000566249 C2CD2LO14523 706 aa9.83□□□□□ -0.84
KARS-206ENST00000566249 RNFT1Q5M7Z0 435 aa9.83□□□□□ -0.84
KARS-206ENST00000566249 BHMTQ93088 406 aa9.83□□□□□ -0.84
KARS-206ENST00000566249 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
KARS-206ENST00000566249 TARSP26639 723 aaKnown RBP9.82□□□□□ -0.84
KARS-206ENST00000566249 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
KARS-206ENST00000566249 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
KARS-206ENST00000566249 DNAJC14Q6Y2X3 702 aaPredicted RBP9.82□□□□□ -0.84
KARS-206ENST00000566249 NLRP13Q86W25 1043 aa9.82□□□□□ -0.84
KARS-206ENST00000566249 DMRTB1Q96MA1 342 aa9.82□□□□□ -0.84
KARS-206ENST00000566249 NSFL1CQ9UNZ2 370 aaKnown RBP9.82□□□□□ -0.84
KARS-206ENST00000566249 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
KARS-206ENST00000566249 ANKRD33BA6NCL7 494 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 GPR182O15218 404 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 WFS1O76024 890 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 RARAP10276 462 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 NFKB1P19838 968 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms