RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NTSR2O95665 410 aa17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 CDCA7LQ96GN5 454 aa17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 NPR1P16066 1061 aa17.77■□□□□ 0.44
HERPUD1-210ENST00000565966 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
HERPUD1-210ENST00000565966 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
HERPUD1-210ENST00000565966 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-210ENST00000565966 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-210ENST00000565966 TNRC6CQ9HCJ0 1690 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-210ENST00000565966 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
HERPUD1-210ENST00000565966 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 TRMT2AQ8IZ69 625 aaKnown RBP17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
HERPUD1-210ENST00000565966 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
HERPUD1-210ENST00000565966 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-210ENST00000565966 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
HERPUD1-210ENST00000565966 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-210ENST00000565966 LAMB2P55268 1798 aa17.74■□□□□ 0.43
HERPUD1-210ENST00000565966 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
HERPUD1-210ENST00000565966 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
HERPUD1-210ENST00000565966 C21orf2O43822 256 aa17.72■□□□□ 0.43
HERPUD1-210ENST00000565966 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-210ENST00000565966 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
HERPUD1-210ENST00000565966 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
HERPUD1-210ENST00000565966 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 G2E3Q7L622 706 aa17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 MYD88Q99836 296 aa17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 METTL22Q9BUU2 404 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-210ENST00000565966 ADCY9O60503 1353 aa17.7■□□□□ 0.42
HERPUD1-210ENST00000565966 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
HERPUD1-210ENST00000565966 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-210ENST00000565966 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
HERPUD1-210ENST00000565966 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
HERPUD1-210ENST00000565966 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 FLIIQ13045 1269 aa17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
HERPUD1-210ENST00000565966 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 RASSF7Q02833 373 aa17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 ZNF428Q96B54 188 aa17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
HERPUD1-210ENST00000565966 TAF1P21675 1872 aa17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 NFKBIEO00221 500 aa17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 LMNB1P20700 586 aa17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
HERPUD1-210ENST00000565966 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
HERPUD1-210ENST00000565966 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-210ENST00000565966 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
HERPUD1-210ENST00000565966 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-210ENST00000565966 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-210ENST00000565966 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
HERPUD1-210ENST00000565966 LTBP3Q9NS15 1303 aa17.65■□□□□ 0.42
HERPUD1-210ENST00000565966 MYH3P11055 1940 aa17.64■□□□□ 0.42
HERPUD1-210ENST00000565966 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 PRELPP51888 382 aa17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 DNAAF4Q8WXU2 420 aa17.64■□□□□ 0.41
HERPUD1-210ENST00000565966 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-210ENST00000565966 DDX46Q7L014 1031 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-210ENST00000565966 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-210ENST00000565966 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-210ENST00000565966 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 BBOX1O75936 387 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 CT47B1P0C2W7 299 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 ABCC4O15439 1325 aa17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
HERPUD1-210ENST00000565966 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-210ENST00000565966 PDE8AO60658 829 aa17.6■□□□□ 0.41
HERPUD1-210ENST00000565966 GRAPQ13588 217 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms