RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NLRP3Q96P20 1036 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 CHPF2Q9P2E5 772 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
USB1-211ENST00000565662 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
USB1-211ENST00000565662 KIF3CO14782 793 aa21.63■■□□□ 1.05
USB1-211ENST00000565662 GPTP24298 496 aa21.63■■□□□ 1.05
USB1-211ENST00000565662 RBM17Q96I25 401 aaKnown RBP21.63■■□□□ 1.05
USB1-211ENST00000565662 ABCC12Q96J65 1359 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 GLTPD2A6NH11 291 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 HOXA10P31260 410 aaPredicted RBP21.62■■□□□ 1.05
USB1-211ENST00000565662 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 CCDC30Q5VVM6 783 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 SUSD4Q5VX71 490 aa21.62■■□□□ 1.05
USB1-211ENST00000565662 FKBP4Q02790 459 aaKnown RBP eCLIP21.61■■□□□ 1.05
USB1-211ENST00000565662 AIMP1Q12904 312 aaKnown RBP21.61■■□□□ 1.05
USB1-211ENST00000565662 PROSER3Q2NL68 480 aa21.61■■□□□ 1.05
USB1-211ENST00000565662 ERFEQ4G0M1 354 aa21.61■■□□□ 1.05
USB1-211ENST00000565662 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
USB1-211ENST00000565662 RBM46Q8TBY0 533 aaKnown RBP21.61■■□□□ 1.05
USB1-211ENST00000565662 CRAMP1Q96RY5 1269 aa21.61■■□□□ 1.05
USB1-211ENST00000565662 DDX58O95786 925 aaKnown RBP21.6■■□□□ 1.05
USB1-211ENST00000565662 SLC10A5Q5PT55 438 aa21.6■■□□□ 1.05
USB1-211ENST00000565662 NUTM1Q86Y26 1132 aa21.6■■□□□ 1.05
USB1-211ENST00000565662 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
USB1-211ENST00000565662 SH3TC1Q8TE82 1336 aa21.59■■□□□ 1.05
USB1-211ENST00000565662 C7orf43Q8WVR3 580 aa21.59■■□□□ 1.05
USB1-211ENST00000565662 WDR90Q96KV7 1748 aa21.59■■□□□ 1.05
USB1-211ENST00000565662 PSMD1Q99460 953 aa21.59■■□□□ 1.05
USB1-211ENST00000565662 CACNA1FO60840 1977 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 FSTL1Q12841 308 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 KRT24Q2M2I5 525 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 NLRP10Q86W26 655 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 WWC1Q8IX03 1113 aa21.58■■□□□ 1.05
USB1-211ENST00000565662 ANXA1P04083 346 aa21.57■■□□□ 1.04
USB1-211ENST00000565662 VEGFAP15692 232 aaPredicted RBP21.57■■□□□ 1.04
USB1-211ENST00000565662 HSPA6P17066 643 aa21.57■■□□□ 1.04
USB1-211ENST00000565662 TRIM28Q13263 835 aaKnown RBP21.57■■□□□ 1.04
USB1-211ENST00000565662 STK31Q9BXU1 1019 aa21.57■■□□□ 1.04
USB1-211ENST00000565662 TRMT112Q9UI30 125 aaKnown RBP21.57■■□□□ 1.04
USB1-211ENST00000565662 LAMB2P55268 1798 aa21.56■■□□□ 1.04
USB1-211ENST00000565662 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
USB1-211ENST00000565662 VPS33BQ9H267 617 aa21.56■■□□□ 1.04
USB1-211ENST00000565662 ZNF219Q9P2Y4 722 aaPredicted RBP21.56■■□□□ 1.04
USB1-211ENST00000565662 NMRK2Q9NPI5 230 aa21.55■■□□□ 1.04
USB1-211ENST00000565662 PPEF1O14829 653 aaPredicted RBP21.54■■□□□ 1.04
USB1-211ENST00000565662 RIC3Q7Z5B4 369 aa21.54■■□□□ 1.04
USB1-211ENST00000565662 IQCA1LA6NCM1 817 aa21.53■■□□□ 1.04
USB1-211ENST00000565662 BBOX1O75936 387 aa21.53■■□□□ 1.04
USB1-211ENST00000565662 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
USB1-211ENST00000565662 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
USB1-211ENST00000565662 SUPT20HQ8NEM7 779 aa21.53■■□□□ 1.04
USB1-211ENST00000565662 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
USB1-211ENST00000565662 SCN4AP35499 1836 aa21.52■■□□□ 1.04
USB1-211ENST00000565662 APLP1P51693 650 aa21.52■■□□□ 1.04
USB1-211ENST00000565662 SMC1BQ8NDV3 1235 aa21.52■■□□□ 1.04
USB1-211ENST00000565662 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
USB1-211ENST00000565662 IARSP41252 1262 aaKnown RBP21.51■■□□□ 1.03
USB1-211ENST00000565662 CCDC191Q8NCU4 936 aa21.51■■□□□ 1.03
USB1-211ENST00000565662 SNED1Q8TER0 1413 aa21.51■■□□□ 1.03
USB1-211ENST00000565662 PRELPP51888 382 aa21.5■■□□□ 1.03
USB1-211ENST00000565662 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
USB1-211ENST00000565662 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
USB1-211ENST00000565662 RRAGCQ9HB90 399 aa21.5■■□□□ 1.03
USB1-211ENST00000565662 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
USB1-211ENST00000565662 NEXNQ0ZGT2 675 aa21.49■■□□□ 1.03
USB1-211ENST00000565662 C8orf58Q8NAV2 365 aa21.49■■□□□ 1.03
USB1-211ENST00000565662 ATP6V0A2Q9Y487 856 aa21.49■■□□□ 1.03
USB1-211ENST00000565662 ELL2O00472 640 aaPredicted RBP21.48■■□□□ 1.03
USB1-211ENST00000565662 GRAPQ13588 217 aa21.48■■□□□ 1.03
USB1-211ENST00000565662 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
USB1-211ENST00000565662 ZBTB38Q8NAP3 1195 aaPredicted RBP21.48■■□□□ 1.03
USB1-211ENST00000565662 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
USB1-211ENST00000565662 L3MBTL3Q96JM7 780 aaPredicted RBP21.48■■□□□ 1.03
USB1-211ENST00000565662 ABCC4O15439 1325 aa21.48■■□□□ 1.03
USB1-211ENST00000565662 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
USB1-211ENST00000565662 SP8Q8IXZ3 490 aa21.46■■□□□ 1.03
USB1-211ENST00000565662 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
USB1-211ENST00000565662 METTL22Q9BUU2 404 aaPredicted RBP21.46■■□□□ 1.03
USB1-211ENST00000565662 ZNF277Q9NRM2 450 aaPredicted RBP21.46■■□□□ 1.03
USB1-211ENST00000565662 CWC25Q9NXE8 425 aaPredicted RBP21.46■■□□□ 1.03
USB1-211ENST00000565662 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
USB1-211ENST00000565662 LRRC37AA6NMS7 1700 aa21.46■■□□□ 1.03
USB1-211ENST00000565662 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
USB1-211ENST00000565662 FZD9O00144 591 aa21.44■■□□□ 1.02
USB1-211ENST00000565662 PCCAP05165 728 aaPredicted RBP21.44■■□□□ 1.02
USB1-211ENST00000565662 HCLS1P14317 486 aaPredicted RBP21.44■■□□□ 1.02
USB1-211ENST00000565662 KSR2Q6VAB6 950 aa21.44■■□□□ 1.02
USB1-211ENST00000565662 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
USB1-211ENST00000565662 GPC2Q8N158 579 aa21.44■■□□□ 1.02
USB1-211ENST00000565662 PHAXQ9H814 394 aaKnown RBP21.44■■□□□ 1.02
USB1-211ENST00000565662 ATP5J2-PTCD1G3V325 749 aa21.43■■□□□ 1.02
USB1-211ENST00000565662 IRS4O14654 1257 aaPredicted RBP21.43■■□□□ 1.02
USB1-211ENST00000565662 LARGE2Q8N3Y3 721 aa21.43■■□□□ 1.02
USB1-211ENST00000565662 RTFDC1Q9BY42 306 aaPredicted RBP21.43■■□□□ 1.02
USB1-211ENST00000565662 CCDC152Q4G0S7 254 aa21.42■■□□□ 1.02
USB1-211ENST00000565662 DPP8Q6V1X1 898 aaPredicted RBP21.42■■□□□ 1.02
USB1-211ENST00000565662 NIM1KQ8IY84 436 aa21.42■■□□□ 1.02
USB1-211ENST00000565662 TSPYL6Q8N831 410 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms