RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CFAP54Q96N23 3096 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 DLG5Q8TDM6 1919 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 CEMIPQ8WUJ3 1361 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 HAND2P61296 217 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 FAM208AQ9UK61 1670 aaKnown RBP4.03□□□□□ -1.76
CHD9-213ENST00000564845 STRCP1A6NGW2 1772 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 LRRC24Q50LG9 513 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 VPS53Q5VIR6 699 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 WDR63Q8IWG1 891 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 SMC5Q8IY18 1101 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 XAGE3Q8WTP9 111 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 ZFHX4Q86UP3 3567 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 LARGE1O95461 756 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 FAM98CQ17RN3 349 aaKnown RBP4.03□□□□□ -1.76
CHD9-213ENST00000564845 OLFM4Q6UX06 510 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 SUCLG2Q96I99 432 aa4.03□□□□□ -1.76
CHD9-213ENST00000564845 CYP27B1O15528 508 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 IL17RAQ96F46 866 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 PLEKHG3A1L390 1219 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 HLFQ16534 295 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 STK31Q9BXU1 1019 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 NUCB1Q02818 461 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 KCTD19Q17RG1 926 aaPredicted RBP4.02□□□□□ -1.77
CHD9-213ENST00000564845 GPHNQ9NQX3 736 aaPredicted RBP4.02□□□□□ -1.77
CHD9-213ENST00000564845 HSP90AB4PQ58FF6 505 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 BPTFQ12830 3046 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 DCAF8L1A6NGE4 600 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 CABP4P57796 275 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 RAPGEF4Q8WZA2 1011 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 FKBP4Q02790 459 aaKnown RBP eCLIP4.02□□□□□ -1.771e-6■■■■■ 33.9
CHD9-213ENST00000564845 MSNP26038 577 aaKnown RBP4.02□□□□□ -1.77
CHD9-213ENST00000564845 NEK4P51957 841 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 PTH1RQ03431 593 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 ISM2Q6H9L7 571 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 LUC7LQ9NQ29 371 aaKnown RBP4.02□□□□□ -1.77
CHD9-213ENST00000564845 NPHP3Q7Z494 1330 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 TRPM3Q9HCF6 1732 aaPredicted RBP4.02□□□□□ -1.77
CHD9-213ENST00000564845 COL18A1P39060 1754 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 A0A0C4DFX4 3053 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 DDX11L8A8MPP1 907 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 BRINP3Q76B58 766 aa4.02□□□□□ -1.77
CHD9-213ENST00000564845 UBTFL1P0CB47 393 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 FTOQ9C0B1 505 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD9-213ENST00000564845 RNMTO43148 476 aaKnown RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 PRIM1P49642 420 aaKnown RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 EIF4A1P60842 406 aaKnown RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 HOOK3Q86VS8 718 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 CCDC112Q8NEF3 446 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 ZKSCAN3Q9BRR0 538 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 MAPK8IP2Q13387 824 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 IFT57Q9NWB7 429 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 PLEKHG2Q9H7P9 1386 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 N4BP2Q86UW6 1770 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 DDX12PQ92771 950 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 CCP110O43303 1012 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 AACSQ86V21 672 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 ZNF830Q96NB3 372 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 HCLS1P14317 486 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 DESP17661 470 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 TFCP2Q12800 502 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 ZNF142P52746 1687 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 TTLL5Q6EMB2 1281 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 RGPD5Q99666 1765 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 CHL1O00533 1208 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 CAMK4Q16566 473 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 ZNF589Q86UQ0 364 aaPredicted RBP4.01□□□□□ -1.77
CHD9-213ENST00000564845 KIF1AQ12756 1690 aa4.01□□□□□ -1.77
CHD9-213ENST00000564845 hCG_1642624A0A1W2PR95 340 aa4□□□□□ -1.77
CHD9-213ENST00000564845 PDE3AQ14432 1141 aa4□□□□□ -1.77
CHD9-213ENST00000564845 SAMD1Q6SPF0 538 aaPredicted RBP4□□□□□ -1.77
CHD9-213ENST00000564845 RASEFQ8IZ41 740 aa4□□□□□ -1.77
CHD9-213ENST00000564845 EDC4Q6P2E9 1401 aaKnown RBP4□□□□□ -1.77
CHD9-213ENST00000564845 PLCD4Q9BRC7 762 aa4□□□□□ -1.77
CHD9-213ENST00000564845 GOLGA6L3A6NEY3 463 aa4□□□□□ -1.77
CHD9-213ENST00000564845 PRPF40AO75400 957 aaKnown RBP4□□□□□ -1.77
CHD9-213ENST00000564845 TRAF1Q13077 416 aa4□□□□□ -1.77
CHD9-213ENST00000564845 MYL10Q9BUA6 226 aa4□□□□□ -1.77
CHD9-213ENST00000564845 A0A087WZG4 1122 aa4□□□□□ -1.77
CHD9-213ENST00000564845 AXDND1Q5T1B0 1012 aaPredicted RBP4□□□□□ -1.77
CHD9-213ENST00000564845 GAS2L3Q86XJ1 694 aa4□□□□□ -1.77
CHD9-213ENST00000564845 ANKRD20A12PQ8NF67 263 aa4□□□□□ -1.77
CHD9-213ENST00000564845 SEC31BQ9NQW1 1179 aa4□□□□□ -1.77
CHD9-213ENST00000564845 GTF3C5Q9Y5Q8 519 aaPredicted RBP4□□□□□ -1.77
CHD9-213ENST00000564845 SIPA1L3O60292 1781 aaPredicted RBP4□□□□□ -1.77
CHD9-213ENST00000564845 MCM2P49736 904 aa4□□□□□ -1.77
CHD9-213ENST00000564845 ZNF790Q6PG37 636 aa4□□□□□ -1.77
CHD9-213ENST00000564845 HIP1O00291 1037 aa4□□□□□ -1.77
CHD9-213ENST00000564845 CPLX2Q6PUV4 134 aaKnown RBP4□□□□□ -1.77
CHD9-213ENST00000564845 GPIHBP1Q8IV16 184 aa4□□□□□ -1.77
CHD9-213ENST00000564845 ZNF287Q9HBT7 754 aa4□□□□□ -1.77
CHD9-213ENST00000564845 GADD45BO75293 160 aaPredicted RBP4□□□□□ -1.77
CHD9-213ENST00000564845 HSP90AA4PQ58FG1 418 aa4□□□□□ -1.77
CHD9-213ENST00000564845 ZNF710Q8N1W2 664 aa4□□□□□ -1.77
CHD9-213ENST00000564845 COL6A3P12111 3177 aa4□□□□□ -1.77
CHD9-213ENST00000564845 IGKV5-2P06315 115 aa4□□□□□ -1.77
CHD9-213ENST00000564845 MSL1Q68DK7 614 aa4□□□□□ -1.77
CHD9-213ENST00000564845 PRPF40BQ6NWY9 871 aaKnown RBP4□□□□□ -1.77
CHD9-213ENST00000564845 SLAIN2Q9P270 581 aa4□□□□□ -1.77
CHD9-213ENST00000564845 TTC5Q8N0Z6 440 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms