RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ABCC12Q96J65 1359 aa23.66■■□□□ 1.38
SYNGR3-204ENST00000564642 ALDH1B1P30837 517 aa23.66■■□□□ 1.38
SYNGR3-204ENST00000564642 RASSF7Q02833 373 aa23.66■■□□□ 1.38
SYNGR3-204ENST00000564642 CCDC88AQ3V6T2 1871 aa23.65■■□□□ 1.38
SYNGR3-204ENST00000564642 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
SYNGR3-204ENST00000564642 SOGA3Q5TF21 947 aa23.65■■□□□ 1.38
SYNGR3-204ENST00000564642 NLRP10Q86W26 655 aa23.65■■□□□ 1.38
SYNGR3-204ENST00000564642 PHAXQ9H814 394 aaKnown RBP23.65■■□□□ 1.38
SYNGR3-204ENST00000564642 TNRC6CQ9HCJ0 1690 aaKnown RBP23.64■■□□□ 1.38
SYNGR3-204ENST00000564642 CAPN15O75808 1086 aa23.64■■□□□ 1.37
SYNGR3-204ENST00000564642 GOLGA2Q08379 1002 aa23.64■■□□□ 1.37
SYNGR3-204ENST00000564642 RIC3Q7Z5B4 369 aa23.64■■□□□ 1.37
SYNGR3-204ENST00000564642 RPGRQ92834 1020 aaKnown RBP23.64■■□□□ 1.37
SYNGR3-204ENST00000564642 LMNB1P20700 586 aa23.63■■□□□ 1.37
SYNGR3-204ENST00000564642 RIC1Q4ADV7 1423 aa23.63■■□□□ 1.37
SYNGR3-204ENST00000564642 NLRP3Q96P20 1036 aa23.63■■□□□ 1.37
SYNGR3-204ENST00000564642 STK31Q9BXU1 1019 aa23.63■■□□□ 1.37
SYNGR3-204ENST00000564642 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
SYNGR3-204ENST00000564642 RNF123Q5XPI4 1314 aa23.62■■□□□ 1.37
SYNGR3-204ENST00000564642 CRY2Q49AN0 593 aa23.62■■□□□ 1.37
SYNGR3-204ENST00000564642 FER1L6Q2WGJ9 1857 aa23.62■■□□□ 1.37
SYNGR3-204ENST00000564642 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
SYNGR3-204ENST00000564642 NFKBIEO00221 500 aa23.61■■□□□ 1.37
SYNGR3-204ENST00000564642 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-204ENST00000564642 HSPA6P17066 643 aa23.61■■□□□ 1.37
SYNGR3-204ENST00000564642 SLC10A5Q5PT55 438 aa23.61■■□□□ 1.37
SYNGR3-204ENST00000564642 ATP5J2-PTCD1G3V325 749 aa23.6■■□□□ 1.37
SYNGR3-204ENST00000564642 RBM17Q96I25 401 aaKnown RBP23.6■■□□□ 1.37
SYNGR3-204ENST00000564642 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
SYNGR3-204ENST00000564642 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
SYNGR3-204ENST00000564642 TCERG1O14776 1098 aaKnown RBP23.59■■□□□ 1.37
SYNGR3-204ENST00000564642 CCDC93Q567U6 631 aa23.59■■□□□ 1.37
SYNGR3-204ENST00000564642 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
SYNGR3-204ENST00000564642 TAOK3Q9H2K8 898 aa23.59■■□□□ 1.37
SYNGR3-204ENST00000564642 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
SYNGR3-204ENST00000564642 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
SYNGR3-204ENST00000564642 ZNF428Q96B54 188 aa23.58■■□□□ 1.37
SYNGR3-204ENST00000564642 MYH16Q9H6N6 1097 aa23.58■■□□□ 1.37
SYNGR3-204ENST00000564642 HCLS1P14317 486 aaPredicted RBP23.57■■□□□ 1.36
SYNGR3-204ENST00000564642 PRELPP51888 382 aa23.57■■□□□ 1.36
SYNGR3-204ENST00000564642 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
SYNGR3-204ENST00000564642 SYNE4Q8N205 404 aa23.57■■□□□ 1.36
SYNGR3-204ENST00000564642 LTBP3Q9NS15 1303 aa23.57■■□□□ 1.36
SYNGR3-204ENST00000564642 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 TRIM28Q13263 835 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 C3orf67Q6ZVT6 689 aa23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 RTKN2Q8IZC4 609 aa23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 MYD88Q99836 296 aa23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 SPINK5Q9NQ38 1064 aaPredicted RBP23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 ZC3H4Q9UPT8 1303 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-204ENST00000564642 KDM2BQ8NHM5 1336 aa23.55■■□□□ 1.36
SYNGR3-204ENST00000564642 DICER1Q9UPY3 1922 aaKnown RBP23.55■■□□□ 1.36
SYNGR3-204ENST00000564642 VAMP4O75379 141 aa23.54■■□□□ 1.36
SYNGR3-204ENST00000564642 FAM89AQ96GI7 184 aa23.54■■□□□ 1.36
SYNGR3-204ENST00000564642 LAMB2P55268 1798 aa23.54■■□□□ 1.36
SYNGR3-204ENST00000564642 CACNA1FO60840 1977 aa23.54■■□□□ 1.36
SYNGR3-204ENST00000564642 FKBP4Q02790 459 aaKnown RBP eCLIP23.53■■□□□ 1.36
SYNGR3-204ENST00000564642 OLFM4Q6UX06 510 aa23.53■■□□□ 1.36
SYNGR3-204ENST00000564642 KSR2Q6VAB6 950 aa23.53■■□□□ 1.36
SYNGR3-204ENST00000564642 METTL22Q9BUU2 404 aaPredicted RBP23.53■■□□□ 1.36
SYNGR3-204ENST00000564642 MAP3K2Q9Y2U5 619 aa23.53■■□□□ 1.36
SYNGR3-204ENST00000564642 RTL5Q5HYW3 569 aaPredicted RBP23.52■■□□□ 1.36
SYNGR3-204ENST00000564642 CC2D2BQ6DHV5 1058 aa23.52■■□□□ 1.36
SYNGR3-204ENST00000564642 TMX4Q9H1E5 349 aaPredicted RBP23.52■■□□□ 1.36
SYNGR3-204ENST00000564642 TIAM2Q8IVF5 1701 aa23.52■■□□□ 1.36
SYNGR3-204ENST00000564642 PI4KAP2A4QPH2 592 aa23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 PPEF1O14829 653 aaPredicted RBP23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 DDX46Q7L014 1031 aaKnown RBP23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 PI4KAP1Q8N8J0 262 aa23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 CCDC191Q8NCU4 936 aa23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 ZNF521Q96K83 1311 aa23.51■■□□□ 1.35
SYNGR3-204ENST00000564642 KIF3CO14782 793 aa23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 GRIPAP1Q4V328 841 aa23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 G2E3Q7L622 706 aa23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 ZBTB38Q8NAP3 1195 aaPredicted RBP23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 NMRK2Q9NPI5 230 aa23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
SYNGR3-204ENST00000564642 GLTPD2A6NH11 291 aa23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 IRS4O14654 1257 aaPredicted RBP23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 HSP90B1P14625 803 aaKnown RBP23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 DIEXFQ68CQ4 756 aaKnown RBP23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 DPY19L2Q6NUT2 758 aa23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 CWC25Q9NXE8 425 aaPredicted RBP23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 ABCC4O15439 1325 aa23.49■■□□□ 1.35
SYNGR3-204ENST00000564642 BBOX1O75936 387 aa23.48■■□□□ 1.35
SYNGR3-204ENST00000564642 FLIIQ13045 1269 aa23.48■■□□□ 1.35
SYNGR3-204ENST00000564642 ZNF277Q9NRM2 450 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-204ENST00000564642 FKBP5Q13451 457 aaPredicted RBP23.47■■□□□ 1.35
SYNGR3-204ENST00000564642 RRAGCQ9HB90 399 aa23.47■■□□□ 1.35
SYNGR3-204ENST00000564642 PCCAP05165 728 aaPredicted RBP23.46■■□□□ 1.35
SYNGR3-204ENST00000564642 COL13A1Q5TAT6 717 aaPredicted RBP23.46■■□□□ 1.35
SYNGR3-204ENST00000564642 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
SYNGR3-204ENST00000564642 PSMD1Q99460 953 aa23.46■■□□□ 1.35
SYNGR3-204ENST00000564642 ATP6V0A2Q9Y487 856 aa23.46■■□□□ 1.35
SYNGR3-204ENST00000564642 E9PSI1 815 aa23.45■■□□□ 1.34
SYNGR3-204ENST00000564642 SLC34A2O95436 690 aa23.45■■□□□ 1.34
SYNGR3-204ENST00000564642 GRAPQ13588 217 aa23.45■■□□□ 1.34
SYNGR3-204ENST00000564642 SF3B3Q15393 1217 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms