RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
HERC2-203ENST00000563670 PLEKHF1Q96S99 279 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 TMOD3Q9NYL9 352 aa11.13□□□□□ -0.63
HERC2-203ENST00000563670 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 H0YIN7 160 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 RIPK4P57078 832 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 TEFQ10587 303 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
HERC2-203ENST00000563670 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
HERC2-203ENST00000563670 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
HERC2-203ENST00000563670 RNF123Q5XPI4 1314 aa11.11□□□□□ -0.63
HERC2-203ENST00000563670 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
HERC2-203ENST00000563670 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
HERC2-203ENST00000563670 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
HERC2-203ENST00000563670 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
HERC2-203ENST00000563670 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
HERC2-203ENST00000563670 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
HERC2-203ENST00000563670 TRAF5O00463 557 aa11.1□□□□□ -0.63
HERC2-203ENST00000563670 TMPOP42166 694 aaKnown RBP11.1□□□□□ -0.63
HERC2-203ENST00000563670 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
HERC2-203ENST00000563670 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
HERC2-203ENST00000563670 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
HERC2-203ENST00000563670 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
HERC2-203ENST00000563670 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
HERC2-203ENST00000563670 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
HERC2-203ENST00000563670 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
HERC2-203ENST00000563670 ZIC5Q96T25 663 aa11.09□□□□□ -0.63
HERC2-203ENST00000563670 SLC52A2Q9HAB3 445 aa11.09□□□□□ -0.63
HERC2-203ENST00000563670 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
HERC2-203ENST00000563670 APAF1O14727 1248 aa11.08□□□□□ -0.64
HERC2-203ENST00000563670 MCM10Q7L590 875 aa11.08□□□□□ -0.64
HERC2-203ENST00000563670 GPC2Q8N158 579 aa11.08□□□□□ -0.64
HERC2-203ENST00000563670 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
HERC2-203ENST00000563670 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
HERC2-203ENST00000563670 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
HERC2-203ENST00000563670 TTC5Q8N0Z6 440 aa11.07□□□□□ -0.64
HERC2-203ENST00000563670 MPNDQ8N594 471 aa11.07□□□□□ -0.64
HERC2-203ENST00000563670 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
HERC2-203ENST00000563670 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
HERC2-203ENST00000563670 UNC80Q8N2C7 3258 aa11.07□□□□□ -0.64
HERC2-203ENST00000563670 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
HERC2-203ENST00000563670 TRIOBPQ9H2D6 2365 aa11.06□□□□□ -0.64
HERC2-203ENST00000563670 CARMIL3Q8ND23 1372 aa11.06□□□□□ -0.64
HERC2-203ENST00000563670 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
HERC2-203ENST00000563670 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
HERC2-203ENST00000563670 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
HERC2-203ENST00000563670 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
HERC2-203ENST00000563670 BTBD11A6QL63 1104 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 FZD9O00144 591 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 TRPA1O75762 1119 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 SERPINB2P05120 415 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
HERC2-203ENST00000563670 NFIXQ14938 502 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 TAF7Q15545 349 aaPredicted RBP11.05□□□□□ -0.64
HERC2-203ENST00000563670 FBXO46Q6PJ61 603 aaPredicted RBP11.05□□□□□ -0.64
HERC2-203ENST00000563670 USP50Q70EL3 339 aaPredicted RBP11.05□□□□□ -0.64
HERC2-203ENST00000563670 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
HERC2-203ENST00000563670 PRDM6Q9NQX0 595 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 MRC1P22897 1456 aa11.05□□□□□ -0.64
HERC2-203ENST00000563670 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
HERC2-203ENST00000563670 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
HERC2-203ENST00000563670 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
HERC2-203ENST00000563670 BICDL1Q6ZP65 573 aa11.04□□□□□ -0.64
HERC2-203ENST00000563670 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
HERC2-203ENST00000563670 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
HERC2-203ENST00000563670 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
HERC2-203ENST00000563670 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
HERC2-203ENST00000563670 ZPR1O75312 459 aa11.03□□□□□ -0.64
HERC2-203ENST00000563670 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
HERC2-203ENST00000563670 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
HERC2-203ENST00000563670 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
HERC2-203ENST00000563670 THUMPD2Q9BTF0 503 aaKnown RBP11.03□□□□□ -0.64
HERC2-203ENST00000563670 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
HERC2-203ENST00000563670 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
HERC2-203ENST00000563670 PDE6BP35913 854 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.65
HERC2-203ENST00000563670 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 CNKSR1Q969H4 720 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 BRCA2P51587 3418 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
HERC2-203ENST00000563670 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 POTEFA5A3E0 1075 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 KIF23Q02241 960 aaPredicted RBP11.01□□□□□ -0.65
HERC2-203ENST00000563670 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
HERC2-203ENST00000563670 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
HERC2-203ENST00000563670 ZNF790Q6PG37 636 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 FMNL2Q96PY5 1086 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
HERC2-203ENST00000563670 COL11A2P13942 1736 aaPredicted RBP11.01□□□□□ -0.65
HERC2-203ENST00000563670 HTTP42858 3142 aa11□□□□□ -0.65
HERC2-203ENST00000563670 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
HERC2-203ENST00000563670 SCNN1DP51172 638 aa11□□□□□ -0.65
HERC2-203ENST00000563670 GNAI1P63096 354 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms