RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
AC009088.3-201ENST00000563605 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
AC009088.3-201ENST00000563605 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
AC009088.3-201ENST00000563605 ARFGEF1Q9Y6D6 1849 aa20.1■□□□□ 0.81
AC009088.3-201ENST00000563605 FANCIQ9NVI1 1328 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 LMNB1P20700 586 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 NLRP3Q96P20 1036 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 COL11A2P13942 1736 aaPredicted RBP20.09■□□□□ 0.81
AC009088.3-201ENST00000563605 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
AC009088.3-201ENST00000563605 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
AC009088.3-201ENST00000563605 DLEC1Q9Y238 1755 aa20.08■□□□□ 0.8
AC009088.3-201ENST00000563605 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.8
AC009088.3-201ENST00000563605 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
AC009088.3-201ENST00000563605 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
AC009088.3-201ENST00000563605 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
AC009088.3-201ENST00000563605 SLC10A5Q5PT55 438 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 C7orf43Q8WVR3 580 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 FAM89AQ96GI7 184 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 RBM17Q96I25 401 aaKnown RBP20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 MYD88Q99836 296 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 ISCA1Q9BUE6 129 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
AC009088.3-201ENST00000563605 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
AC009088.3-201ENST00000563605 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
AC009088.3-201ENST00000563605 TAOK3Q9H2K8 898 aa20.05■□□□□ 0.8
AC009088.3-201ENST00000563605 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 HOXA10P31260 410 aaPredicted RBP20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 C1QTNF8P60827 252 aa20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 G2E3Q7L622 706 aa20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 MYH16Q9H6N6 1097 aa20.04■□□□□ 0.8
AC009088.3-201ENST00000563605 NMRK2Q9NPI5 230 aa20.03■□□□□ 0.8
AC009088.3-201ENST00000563605 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
AC009088.3-201ENST00000563605 TNRC6CQ9HCJ0 1690 aaKnown RBP20.03■□□□□ 0.8
AC009088.3-201ENST00000563605 VAMP4O75379 141 aa20.02■□□□□ 0.8
AC009088.3-201ENST00000563605 JARID2Q92833 1246 aaPredicted RBP20.02■□□□□ 0.8
AC009088.3-201ENST00000563605 CRAMP1Q96RY5 1269 aa20.02■□□□□ 0.8
AC009088.3-201ENST00000563605 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
AC009088.3-201ENST00000563605 PI4KAP2A4QPH2 592 aa20.01■□□□□ 0.79
AC009088.3-201ENST00000563605 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
AC009088.3-201ENST00000563605 SLC51AQ86UW1 340 aa20.01■□□□□ 0.79
AC009088.3-201ENST00000563605 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
AC009088.3-201ENST00000563605 PI4KAP1Q8N8J0 262 aa20.01■□□□□ 0.79
AC009088.3-201ENST00000563605 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
AC009088.3-201ENST00000563605 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
AC009088.3-201ENST00000563605 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
AC009088.3-201ENST00000563605 KSR2Q6VAB6 950 aa20■□□□□ 0.79
AC009088.3-201ENST00000563605 METTL22Q9BUU2 404 aaPredicted RBP20■□□□□ 0.79
AC009088.3-201ENST00000563605 RRAGCQ9HB90 399 aa20■□□□□ 0.79
AC009088.3-201ENST00000563605 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
AC009088.3-201ENST00000563605 CACNA1SQ13698 1873 aa20■□□□□ 0.79
AC009088.3-201ENST00000563605 RIC1Q4ADV7 1423 aa20■□□□□ 0.79
AC009088.3-201ENST00000563605 KDM2BQ8NHM5 1336 aa20■□□□□ 0.79
AC009088.3-201ENST00000563605 KIF3CO14782 793 aa19.99■□□□□ 0.79
AC009088.3-201ENST00000563605 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.79
AC009088.3-201ENST00000563605 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
AC009088.3-201ENST00000563605 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 TMX4Q9H1E5 349 aaPredicted RBP19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 SBF1O95248 1867 aa19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 ABCC4O15439 1325 aa19.98■□□□□ 0.79
AC009088.3-201ENST00000563605 FLIIQ13045 1269 aa19.97■□□□□ 0.79
AC009088.3-201ENST00000563605 CCDC191Q8NCU4 936 aa19.97■□□□□ 0.79
AC009088.3-201ENST00000563605 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
AC009088.3-201ENST00000563605 ANKRD36CQ5JPF3 1778 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 GLTPD2A6NH11 291 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 CC2D2BQ6DHV5 1058 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 DPY19L2Q6NUT2 758 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 MIER1Q8N108 512 aa19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 ZBTB38Q8NAP3 1195 aaPredicted RBP19.96■□□□□ 0.79
AC009088.3-201ENST00000563605 BBOX1O75936 387 aa19.95■□□□□ 0.78
AC009088.3-201ENST00000563605 C16orf71Q8IYS4 520 aaPredicted RBP19.95■□□□□ 0.78
AC009088.3-201ENST00000563605 ZC3H4Q9UPT8 1303 aaKnown RBP19.95■□□□□ 0.78
AC009088.3-201ENST00000563605 IGKV5-2P06315 115 aa19.94■□□□□ 0.78
AC009088.3-201ENST00000563605 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
AC009088.3-201ENST00000563605 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
AC009088.3-201ENST00000563605 ARFGEF2Q9Y6D5 1785 aa19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 FER1L6Q2WGJ9 1857 aa19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 IARSP41252 1262 aaKnown RBP19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 GRAPQ13588 217 aa19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 CCDC85AQ96PX6 553 aaPredicted RBP19.93■□□□□ 0.78
AC009088.3-201ENST00000563605 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
AC009088.3-201ENST00000563605 E9PSI1 815 aa19.92■□□□□ 0.78
AC009088.3-201ENST00000563605 DDNO94850 711 aaPredicted RBP19.92■□□□□ 0.78
AC009088.3-201ENST00000563605 SF3B3Q15393 1217 aaKnown RBP19.92■□□□□ 0.78
AC009088.3-201ENST00000563605 PSMD1Q99460 953 aa19.92■□□□□ 0.78
AC009088.3-201ENST00000563605 SP8Q8IXZ3 490 aa19.91■□□□□ 0.78
AC009088.3-201ENST00000563605 DNAAF4Q8WXU2 420 aa19.91■□□□□ 0.78
AC009088.3-201ENST00000563605 CELF1Q92879 486 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms