RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
CDH5-204ENST00000563425 PLCH1Q4KWH8 1693 aa23.62■■□□□ 1.37
CDH5-204ENST00000563425 BTG4Q9NY30 223 aa23.62■■□□□ 1.37
CDH5-204ENST00000563425 TMOD3Q9NYL9 352 aa23.62■■□□□ 1.37
CDH5-204ENST00000563425 BAG4O95429 457 aaKnown RBP23.61■■□□□ 1.37
CDH5-204ENST00000563425 SKOR2Q2VWA4 1001 aaPredicted RBP23.61■■□□□ 1.37
CDH5-204ENST00000563425 SNX14Q9Y5W7 946 aa23.61■■□□□ 1.37
CDH5-204ENST00000563425 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
CDH5-204ENST00000563425 HIP1O00291 1037 aa23.6■■□□□ 1.37
CDH5-204ENST00000563425 UPF3BQ9BZI7 483 aaKnown RBP23.6■■□□□ 1.37
CDH5-204ENST00000563425 CWC25Q9NXE8 425 aaPredicted RBP23.6■■□□□ 1.37
CDH5-204ENST00000563425 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
CDH5-204ENST00000563425 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
CDH5-204ENST00000563425 FOXO4P98177 505 aa23.59■■□□□ 1.37
CDH5-204ENST00000563425 GZF1Q9H116 711 aaPredicted RBP23.59■■□□□ 1.37
CDH5-204ENST00000563425 DISP2A7MBM2 1401 aa23.59■■□□□ 1.37
CDH5-204ENST00000563425 PKP1Q13835 747 aa23.59■■□□□ 1.37
CDH5-204ENST00000563425 INTS4Q96HW7 963 aaKnown RBP23.59■■□□□ 1.37
CDH5-204ENST00000563425 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.37
CDH5-204ENST00000563425 TFCP2Q12800 502 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 LMBR1LQ6UX01 489 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 RASEFQ8IZ41 740 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 CCDC191Q8NCU4 936 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 TNNI3KQ59H18 835 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 L1TD1Q5T7N2 865 aaKnown RBP23.57■■□□□ 1.36
CDH5-204ENST00000563425 BOLA2Q9H3K6 86 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 FPGT-TNNI3KV9GXZ4 949 aa23.57■■□□□ 1.36
CDH5-204ENST00000563425 LRP6O75581 1613 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.56■■□□□ 1.36
CDH5-204ENST00000563425 PTH1RQ03431 593 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 VSIG10Q8N0Z9 540 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 ZBTB3Q9H5J0 574 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 SNRKQ9NRH2 765 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 ZDHHC9Q9Y397 364 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 KAT6BQ8WYB5 2073 aa23.56■■□□□ 1.36
CDH5-204ENST00000563425 FSD2A1L4K1 749 aa23.55■■□□□ 1.36
CDH5-204ENST00000563425 PIGBQ92521 554 aa23.55■■□□□ 1.36
CDH5-204ENST00000563425 KCNB2Q92953 911 aa23.55■■□□□ 1.36
CDH5-204ENST00000563425 TEX13AQ9BXU3 409 aaPredicted RBP23.55■■□□□ 1.36
CDH5-204ENST00000563425 DBNLQ9UJU6 430 aaKnown RBP23.55■■□□□ 1.36
CDH5-204ENST00000563425 ATP5JP18859 108 aa23.55■■□□□ 1.36
CDH5-204ENST00000563425 TTC14Q96N46 770 aa23.55■■□□□ 1.36
CDH5-204ENST00000563425 NMIQ13287 307 aaPredicted RBP23.54■■□□□ 1.36
CDH5-204ENST00000563425 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
CDH5-204ENST00000563425 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
CDH5-204ENST00000563425 NOL8Q76FK4 1167 aaKnown RBP23.53■■□□□ 1.36
CDH5-204ENST00000563425 FAM227BQ96M60 508 aa23.53■■□□□ 1.36
CDH5-204ENST00000563425 FSD1Q9BTV5 496 aa23.53■■□□□ 1.36
CDH5-204ENST00000563425 ATG3Q9NT62 314 aa23.53■■□□□ 1.36
CDH5-204ENST00000563425 GOLGA6L3A6NEY3 463 aa23.52■■□□□ 1.36
CDH5-204ENST00000563425 ISCA1Q9BUE6 129 aa23.52■■□□□ 1.36
CDH5-204ENST00000563425 BRPF3Q9ULD4 1205 aa23.52■■□□□ 1.36
CDH5-204ENST00000563425 NECTIN1Q15223 517 aa23.51■■□□□ 1.35
CDH5-204ENST00000563425 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
CDH5-204ENST00000563425 CHMP3Q9Y3E7 222 aa23.51■■□□□ 1.35
CDH5-204ENST00000563425 TCIRG1Q13488 830 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 MAP4K1Q92918 833 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 TM6SF1Q9BZW5 370 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 MED23Q9ULK4 1368 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 ANKRD36CQ5JPF3 1778 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 BCL9O00512 1426 aa23.5■■□□□ 1.35
CDH5-204ENST00000563425 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 MCTP1Q6DN14 999 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 PRPF40BQ6NWY9 871 aaKnown RBP23.49■■□□□ 1.35
CDH5-204ENST00000563425 ATG9AQ7Z3C6 839 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 AK2P54819 239 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 TRIM28Q13263 835 aaKnown RBP23.49■■□□□ 1.35
CDH5-204ENST00000563425 DBNDD2Q9BQY9 259 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 RBM8AQ9Y5S9 174 aaKnown RBP23.49■■□□□ 1.35
CDH5-204ENST00000563425 RFX7Q2KHR2 1363 aa23.49■■□□□ 1.35
CDH5-204ENST00000563425 BRD1O95696 1058 aa23.48■■□□□ 1.35
CDH5-204ENST00000563425 STARD3NLO95772 234 aa23.48■■□□□ 1.35
CDH5-204ENST00000563425 CASTP20810 708 aaKnown RBP23.48■■□□□ 1.35
CDH5-204ENST00000563425 GPR108Q9NPR9 543 aa23.48■■□□□ 1.35
CDH5-204ENST00000563425 JCADQ9P266 1359 aa23.48■■□□□ 1.35
CDH5-204ENST00000563425 KLHL40Q2TBA0 621 aa23.47■■□□□ 1.35
CDH5-204ENST00000563425 HAUS7Q99871 368 aa23.47■■□□□ 1.35
CDH5-204ENST00000563425 ZSWIM6Q9HCJ5 1215 aa23.47■■□□□ 1.35
CDH5-204ENST00000563425 LMBRD1Q9NUN5 540 aa23.47■■□□□ 1.35
CDH5-204ENST00000563425 ISY1Q9ULR0 285 aaKnown RBP23.47■■□□□ 1.35
CDH5-204ENST00000563425 LIMCH1Q9UPQ0 1083 aa23.47■■□□□ 1.35
CDH5-204ENST00000563425 DOT1LQ8TEK3 1739 aa23.46■■□□□ 1.35
CDH5-204ENST00000563425 IL15P40933 162 aaPredicted RBP23.46■■□□□ 1.35
CDH5-204ENST00000563425 KIF6Q6ZMV9 814 aa23.46■■□□□ 1.35
CDH5-204ENST00000563425 RUFY3Q7L099 469 aa23.46■■□□□ 1.35
CDH5-204ENST00000563425 EDC3Q96F86 508 aaKnown RBP23.46■■□□□ 1.35
CDH5-204ENST00000563425 JAKMIP1Q96N16 626 aaKnown RBP23.46■■□□□ 1.35
CDH5-204ENST00000563425 NUP98P52948 1817 aa23.46■■□□□ 1.35
CDH5-204ENST00000563425 NRAPQ86VF7 1730 aa23.45■■□□□ 1.35
CDH5-204ENST00000563425 ZKSCAN1P17029 563 aaPredicted RBP23.45■■□□□ 1.35
CDH5-204ENST00000563425 ADCK5Q3MIX3 580 aa23.45■■□□□ 1.35
CDH5-204ENST00000563425 CREB3L3Q68CJ9 461 aa23.45■■□□□ 1.35
CDH5-204ENST00000563425 MYH3P11055 1940 aa23.45■■□□□ 1.34
CDH5-204ENST00000563425 EYA2O00167 538 aa23.45■■□□□ 1.34
CDH5-204ENST00000563425 CIAO1O76071 339 aa23.45■■□□□ 1.34
CDH5-204ENST00000563425 VPS53Q5VIR6 699 aa23.45■■□□□ 1.34
CDH5-204ENST00000563425 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
CDH5-204ENST00000563425 EXOC5O00471 708 aa23.44■■□□□ 1.34
CDH5-204ENST00000563425 ZNF330Q9Y3S2 320 aaPredicted RBP23.44■■□□□ 1.34
CDH5-204ENST00000563425 CYP46A1Q9Y6A2 500 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms