RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 H0YIN7 160 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 SRGNP10124 158 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 PDE6BP35913 854 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
UBR1-204ENST00000563239 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 ZNF784Q8NCA9 323 aaPredicted RBP10.98□□□□□ -0.65
UBR1-204ENST00000563239 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 NYXQ9GZU5 481 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 BCS1LQ9Y276 419 aa10.98□□□□□ -0.65
UBR1-204ENST00000563239 PI4KAP2A4QPH2 592 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBR1-204ENST00000563239 FLIIQ13045 1269 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
UBR1-204ENST00000563239 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 PI4KAP1Q8N8J0 262 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 METTL22Q9BUU2 404 aaPredicted RBP10.97□□□□□ -0.65
UBR1-204ENST00000563239 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
UBR1-204ENST00000563239 PDZRN3Q9UPQ7 1066 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 MAP3K2Q9Y2U5 619 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
UBR1-204ENST00000563239 GRIN3BO60391 1043 aa10.96□□□□□ -0.65
UBR1-204ENST00000563239 IGKV5-2P06315 115 aa10.96□□□□□ -0.65
UBR1-204ENST00000563239 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
UBR1-204ENST00000563239 STYK1Q6J9G0 422 aa10.96□□□□□ -0.65
UBR1-204ENST00000563239 MYD88Q99836 296 aa10.96□□□□□ -0.65
UBR1-204ENST00000563239 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 ZBTB22O15209 634 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 NPHP1O15259 732 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
UBR1-204ENST00000563239 GTF2E1P29083 439 aaPredicted RBP10.95□□□□□ -0.66
UBR1-204ENST00000563239 MRPL50Q8N5N7 158 aaKnown RBP10.95□□□□□ -0.66
UBR1-204ENST00000563239 TTLL6Q8N841 843 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 SSH1Q8WYL5 1049 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 ZNF622Q969S3 477 aaKnown RBP eCLIP10.95□□□□□ -0.669e-7■■■□□ 17.5
UBR1-204ENST00000563239 MASTLQ96GX5 879 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 TRMT112Q9UI30 125 aaKnown RBP10.95□□□□□ -0.66
UBR1-204ENST00000563239 ARFGEF1Q9Y6D6 1849 aa10.95□□□□□ -0.66
UBR1-204ENST00000563239 HCLS1P14317 486 aaPredicted RBP10.94□□□□□ -0.66
UBR1-204ENST00000563239 NPR1P16066 1061 aa10.94□□□□□ -0.66
UBR1-204ENST00000563239 HOXA10P31260 410 aaPredicted RBP10.94□□□□□ -0.66
UBR1-204ENST00000563239 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
UBR1-204ENST00000563239 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
UBR1-204ENST00000563239 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
UBR1-204ENST00000563239 SLX4Q8IY92 1834 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 DDX60Q8IY21 1712 aaKnown RBP10.93□□□□□ -0.66
UBR1-204ENST00000563239 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 SH3TC1Q8TE82 1336 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 NEURL1BA8MQ27 555 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 F6X3S4 739 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
UBR1-204ENST00000563239 CWF19L2Q2TBE0 894 aaKnown RBP10.93□□□□□ -0.66
UBR1-204ENST00000563239 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
UBR1-204ENST00000563239 CCDC191Q8NCU4 936 aa10.93□□□□□ -0.66
UBR1-204ENST00000563239 CT47B1P0C2W7 299 aaPredicted RBP10.92□□□□□ -0.66
UBR1-204ENST00000563239 PRELPP51888 382 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 ALDH1L2Q3SY69 923 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 RTL5Q5HYW3 569 aaPredicted RBP10.92□□□□□ -0.66
UBR1-204ENST00000563239 ARHGAP27Q6ZUM4 889 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 SLC51AQ86UW1 340 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 ZBTB38Q8NAP3 1195 aaPredicted RBP10.92□□□□□ -0.66
UBR1-204ENST00000563239 DNAAF4Q8WXU2 420 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 JARID2Q92833 1246 aaPredicted RBP10.92□□□□□ -0.66
UBR1-204ENST00000563239 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
UBR1-204ENST00000563239 LAMB2P55268 1798 aa10.92□□□□□ -0.66
UBR1-204ENST00000563239 C21orf2O43822 256 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
UBR1-204ENST00000563239 CASP7P55210 303 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 BEND3Q5T5X7 828 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 CRAMP1Q96RY5 1269 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 COL4A1P02462 1669 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 SNED1Q8TER0 1413 aa10.91□□□□□ -0.66
UBR1-204ENST00000563239 CHD4Q14839 1912 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 H7C1W4 665 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 NFKBIEO00221 500 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 IRS4O14654 1257 aaPredicted RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 RARSP54136 660 aaKnown RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 BRPF1P55201 1214 aaPredicted RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 GCKRQ14397 625 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 SF3B3Q15393 1217 aaKnown RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 LINS1Q8NG48 757 aa10.9□□□□□ -0.66
UBR1-204ENST00000563239 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
UBR1-204ENST00000563239 CACNA1SQ13698 1873 aa10.89□□□□□ -0.67
UBR1-204ENST00000563239 ABCC4O15439 1325 aa10.89□□□□□ -0.67
UBR1-204ENST00000563239 CDHR2Q9BYE9 1310 aa10.89□□□□□ -0.67
UBR1-204ENST00000563239 RASSF7Q02833 373 aa10.89□□□□□ -0.67
UBR1-204ENST00000563239 NEXNQ0ZGT2 675 aa10.89□□□□□ -0.67
UBR1-204ENST00000563239 RPGRQ92834 1020 aaKnown RBP10.89□□□□□ -0.67
UBR1-204ENST00000563239 RBM17Q96I25 401 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms