RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
LPCAT4-202ENST00000562404 CRY2Q49AN0 593 aa14.41□□□□□ -0.1
LPCAT4-202ENST00000562404 PHAXQ9H814 394 aaKnown RBP14.41□□□□□ -0.1
LPCAT4-202ENST00000562404 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
LPCAT4-202ENST00000562404 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
LPCAT4-202ENST00000562404 LMNB1P20700 586 aa14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 CALD1Q05682 793 aaKnown RBP14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 TCIRG1Q13488 830 aa14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 SNED1Q8TER0 1413 aa14.4□□□□□ -0.1
LPCAT4-202ENST00000562404 PARP10Q53GL7 1025 aa14.39□□□□□ -0.11
LPCAT4-202ENST00000562404 FAM9BQ8IZU0 186 aa14.39□□□□□ -0.11
LPCAT4-202ENST00000562404 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 PPP1R42Q7Z4L9 355 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 UTP14AQ9BVJ6 771 aaKnown RBP14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 COL4A1P02462 1669 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 LTBP3Q9NS15 1303 aa14.38□□□□□ -0.11
LPCAT4-202ENST00000562404 ATP5J2-PTCD1G3V325 749 aa14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 HCLS1P14317 486 aaPredicted RBP14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 SLC10A5Q5PT55 438 aa14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 ISCA1Q9BUE6 129 aa14.37□□□□□ -0.11
LPCAT4-202ENST00000562404 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
LPCAT4-202ENST00000562404 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
LPCAT4-202ENST00000562404 TAOK3Q9H2K8 898 aa14.36□□□□□ -0.11
LPCAT4-202ENST00000562404 IL16Q14005 1332 aa14.36□□□□□ -0.11
LPCAT4-202ENST00000562404 COL4A5P29400 1685 aa14.36□□□□□ -0.11
LPCAT4-202ENST00000562404 ALDH1B1P30837 517 aa14.35□□□□□ -0.11
LPCAT4-202ENST00000562404 CCDC93Q567U6 631 aa14.35□□□□□ -0.11
LPCAT4-202ENST00000562404 RRAGCQ9HB90 399 aa14.35□□□□□ -0.11
LPCAT4-202ENST00000562404 TRMT112Q9UI30 125 aaKnown RBP14.35□□□□□ -0.11
LPCAT4-202ENST00000562404 FANCIQ9NVI1 1328 aa14.35□□□□□ -0.11
LPCAT4-202ENST00000562404 CACNA1FO60840 1977 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 POTECB2RU33 542 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 G2E3Q7L622 706 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 RPGRQ92834 1020 aaKnown RBP14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 ZC3H4Q9UPT8 1303 aaKnown RBP14.34□□□□□ -0.11
LPCAT4-202ENST00000562404 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 SOGA3Q5TF21 947 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 WDR63Q8IWG1 891 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 CRAMP1Q96RY5 1269 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 CEP350Q5VT06 3117 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 ABCC4O15439 1325 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 SH3TC1Q8TE82 1336 aa14.33□□□□□ -0.12
LPCAT4-202ENST00000562404 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
LPCAT4-202ENST00000562404 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
LPCAT4-202ENST00000562404 RNF123Q5XPI4 1314 aa14.32□□□□□ -0.12
LPCAT4-202ENST00000562404 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
LPCAT4-202ENST00000562404 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 MYD88Q99836 296 aa14.31□□□□□ -0.12
LPCAT4-202ENST00000562404 LRRC37AA6NMS7 1700 aa14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 VAMP4O75379 141 aa14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 TOMM70O94826 608 aa14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 DDNO94850 711 aaPredicted RBP14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 RTKN2Q8IZC4 609 aa14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
LPCAT4-202ENST00000562404 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 PSMD1Q99460 953 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 ZNF541Q9H0D2 1346 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 DUOX1Q9NRD9 1551 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 MYH3P11055 1940 aa14.29□□□□□ -0.12
LPCAT4-202ENST00000562404 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
LPCAT4-202ENST00000562404 IARSP41252 1262 aaKnown RBP14.28□□□□□ -0.12
LPCAT4-202ENST00000562404 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
LPCAT4-202ENST00000562404 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 HSPA6P17066 643 aa14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 ATP6V0A2Q9Y487 856 aa14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 SCN4AP35499 1836 aa14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 SPEF2Q9C093 1822 aa14.27□□□□□ -0.13
LPCAT4-202ENST00000562404 FZD9O00144 591 aa14.26□□□□□ -0.13
LPCAT4-202ENST00000562404 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
LPCAT4-202ENST00000562404 GRAPQ13588 217 aa14.26□□□□□ -0.13
LPCAT4-202ENST00000562404 CWF19L2Q2TBE0 894 aaKnown RBP14.26□□□□□ -0.13
LPCAT4-202ENST00000562404 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
LPCAT4-202ENST00000562404 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms