RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 TM4SF1P30408 202 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 FXR1P51114 621 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC01963-201ENST00000562038 SAGE1Q9NXZ1 904 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 UTYO14607 1347 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 MAP3K15Q6ZN16 1313 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 AAMPQ13685 434 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 MCM10Q7L590 875 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 NMRK2Q9NPI5 230 aa7.25□□□□□ -1.25
LINC01963-201ENST00000562038 SLC10A5Q5PT55 438 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 CAMTA2O94983 1202 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 TRAPPC3LQ5T215 181 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 TMC4Q7Z404 712 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 PLBD2Q8NHP8 589 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 ACSBG1Q96GR2 724 aa7.24□□□□□ -1.25
LINC01963-201ENST00000562038 DLL1O00548 723 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 PLA2G12BQ9BX93 195 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 NYXQ9GZU5 481 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 TSHZ2Q9NRE2 1034 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 KIF16BQ96L93 1317 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 SNED1Q8TER0 1413 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 NOM1Q5C9Z4 860 aaKnown RBP7.23□□□□□ -1.25
LINC01963-201ENST00000562038 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 TMED8Q6PL24 325 aaPredicted RBP7.23□□□□□ -1.25
LINC01963-201ENST00000562038 ZNF34Q8IZ26 560 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 VPS33BQ9H267 617 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 LTBP3Q9NS15 1303 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 VAMP4O75379 141 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 DNAJC10Q8IXB1 793 aa7.23□□□□□ -1.25
LINC01963-201ENST00000562038 DDX58O95786 925 aaKnown RBP7.22□□□□□ -1.25
LINC01963-201ENST00000562038 MS4A1P11836 297 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 PTF1AQ7RTS3 328 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 MIER1Q8N108 512 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 ISCA1Q9BUE6 129 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 ALDH1L1O75891 902 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 GIGYF2Q6Y7W6 1299 aaKnown RBP7.22□□□□□ -1.25
LINC01963-201ENST00000562038 NBPF15Q8N660 670 aa7.22□□□□□ -1.25
LINC01963-201ENST00000562038 NBPF26B4DH59 902 aa7.21□□□□□ -1.25
LINC01963-201ENST00000562038 GYS1P13807 737 aa7.21□□□□□ -1.25
LINC01963-201ENST00000562038 NBPF10Q6P3W6 841 aaKnown RBP7.21□□□□□ -1.25
LINC01963-201ENST00000562038 COL23A1Q86Y22 540 aaPredicted RBP7.21□□□□□ -1.25
LINC01963-201ENST00000562038 MAP2K2P36507 400 aa7.21□□□□□ -1.26
LINC01963-201ENST00000562038 KIF6Q6ZMV9 814 aa7.21□□□□□ -1.26
LINC01963-201ENST00000562038 CCDC146Q8IYE0 955 aa7.21□□□□□ -1.26
LINC01963-201ENST00000562038 A0A1W2PPC1 479 aa7.21□□□□□ -1.26
LINC01963-201ENST00000562038 VEGFAP15692 232 aaPredicted RBP7.21□□□□□ -1.26
LINC01963-201ENST00000562038 TWISTNBQ3B726 338 aaPredicted RBP7.21□□□□□ -1.26
LINC01963-201ENST00000562038 STYK1Q6J9G0 422 aa7.21□□□□□ -1.26
LINC01963-201ENST00000562038 GLTPD2A6NH11 291 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 CHADLQ6NUI6 762 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 ARHGEF1Q92888 912 aaKnown RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 CHMP4BQ9H444 224 aaKnown RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 BCL2L12Q9HB09 334 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 ZBTB1Q9Y2K1 713 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 ABCC4O15439 1325 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 PAPPA2Q9BXP8 1791 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 POLRMTO00411 1230 aaKnown RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 GNPATO15228 680 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 LBX1P52954 281 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 CRY2Q49AN0 593 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 SOGA3Q5TF21 947 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 CCDC191Q8NCU4 936 aa7.2□□□□□ -1.26
LINC01963-201ENST00000562038 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
LINC01963-201ENST00000562038 HDGFL1Q5TGJ6 251 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 CC2D2BQ6DHV5 1058 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 KSR2Q6VAB6 950 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 CEP350Q5VT06 3117 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 MMP14P50281 582 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 MRPL50Q8N5N7 158 aaKnown RBP7.19□□□□□ -1.26
LINC01963-201ENST00000562038 SYTL4Q96C24 671 aaPredicted RBP7.19□□□□□ -1.26
LINC01963-201ENST00000562038 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
LINC01963-201ENST00000562038 STK31Q9BXU1 1019 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
LINC01963-201ENST00000562038 MCOLN1Q9GZU1 580 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 AKAP11Q9UKA4 1901 aa7.19□□□□□ -1.26
LINC01963-201ENST00000562038 RFC4P35249 363 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 TCIRG1Q13488 830 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 PKN2Q16513 984 aaKnown RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 ZFP91Q96JP5 570 aaPredicted RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 RBM42Q9BTD8 480 aaKnown RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 TFCP2L1Q9NZI6 479 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 MAST2Q6P0Q8 1798 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 KCNQ3O43525 872 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 ZPR1O75312 459 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 HOXD11P31277 338 aaPredicted RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 DCTN1Q14203 1278 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 BRIP1Q9BX63 1249 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 USP16Q9Y5T5 823 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 PCCAP05165 728 aaPredicted RBP7.18□□□□□ -1.26
LINC01963-201ENST00000562038 SLC39A6Q13433 755 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 PPP1R42Q7Z4L9 355 aa7.18□□□□□ -1.26
LINC01963-201ENST00000562038 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 POTECB2RU33 542 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 IPO8O15397 1037 aaKnown RBP7.17□□□□□ -1.26
LINC01963-201ENST00000562038 PDE6BP35913 854 aa7.17□□□□□ -1.26
LINC01963-201ENST00000562038 C8orf58Q8NAV2 365 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms