RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RNF40O75150 1001 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 TATP17735 454 aaPredicted RBP7.6□□□□□ -1.19
HERC1-213ENST00000561359 RFC4P35249 363 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 ATP6V1AP38606 617 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
HERC1-213ENST00000561359 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 USHBP1Q8N6Y0 703 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 BEGAINQ9BUH8 593 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 HPS5Q9UPZ3 1129 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 KIAA1551Q9HCM1 1747 aa7.6□□□□□ -1.19
HERC1-213ENST00000561359 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 C3orf80F5H4A9 247 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 TULP1O00294 542 aaPredicted RBP7.59□□□□□ -1.19
HERC1-213ENST00000561359 GYS1P13807 737 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 HOXC9P31274 260 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 PPP4CP60510 307 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 ITPK1Q13572 414 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 TSR3Q9UJK0 312 aaKnown RBP7.59□□□□□ -1.19
HERC1-213ENST00000561359 KIF13BQ9NQT8 1826 aa7.59□□□□□ -1.19
HERC1-213ENST00000561359 DEFB115Q30KQ5 88 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 TTC13Q8NBP0 860 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 ASAP1Q9ULH1 1129 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 KDM6AO15550 1401 aaPredicted RBP7.58□□□□□ -1.2
HERC1-213ENST00000561359 LTN1O94822 1766 aa7.58□□□□□ -1.2
HERC1-213ENST00000561359 ARFGEF1Q9Y6D6 1849 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 MAP3K19Q56UN5 1328 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 PASKQ96RG2 1323 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 CYP27B1O15528 508 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 SLC4A3P48751 1232 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 PRPF38BQ5VTL8 546 aaKnown RBP7.57□□□□□ -1.2
HERC1-213ENST00000561359 NYAP1Q6ZVC0 841 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 HDGFL2Q7Z4V5 671 aaPredicted RBP7.57□□□□□ -1.2
HERC1-213ENST00000561359 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 MCOLN1Q9GZU1 580 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 SBNO2Q9Y2G9 1366 aa7.57□□□□□ -1.2
HERC1-213ENST00000561359 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
HERC1-213ENST00000561359 WDR33Q9C0J8 1336 aaKnown RBP7.56□□□□□ -1.2
HERC1-213ENST00000561359 ERFEQ4G0M1 354 aa7.56□□□□□ -1.2
HERC1-213ENST00000561359 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
HERC1-213ENST00000561359 ABT1Q9ULW3 272 aaKnown RBP7.56□□□□□ -1.2
HERC1-213ENST00000561359 SBF1O95248 1867 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 BRCA1P38398 1863 aaKnown RBP7.55□□□□□ -1.2
HERC1-213ENST00000561359 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 RASSF10A6NK89 507 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 DDNO94850 711 aaPredicted RBP7.55□□□□□ -1.2
HERC1-213ENST00000561359 FBLN1P23142 703 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 DDR1Q08345 913 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 GRM1Q13255 1194 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 TTLL6Q8N841 843 aa7.55□□□□□ -1.2
HERC1-213ENST00000561359 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
HERC1-213ENST00000561359 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 NFKBIEO00221 500 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 ITGBL1O95965 494 aaPredicted RBP7.54□□□□□ -1.2
HERC1-213ENST00000561359 HIC1Q14526 733 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 EAPPQ56P03 285 aaPredicted RBP7.54□□□□□ -1.2
HERC1-213ENST00000561359 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
HERC1-213ENST00000561359 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 COG3Q96JB2 828 aa7.54□□□□□ -1.2
HERC1-213ENST00000561359 SRP68Q9UHB9 627 aaKnown RBP7.54□□□□□ -1.2
HERC1-213ENST00000561359 EDC4Q6P2E9 1401 aaKnown RBP7.53□□□□□ -1.2
HERC1-213ENST00000561359 SMG6Q86US8 1419 aaKnown RBP7.53□□□□□ -1.2
HERC1-213ENST00000561359 SOX10P56693 466 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 DGKZQ13574 1117 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 SWT1Q5T5J6 900 aaKnown RBP7.53□□□□□ -1.2
HERC1-213ENST00000561359 CAPNS2Q96L46 248 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
HERC1-213ENST00000561359 EYA1Q99502 592 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 TAF1DQ9H5J8 278 aaPredicted RBP7.53□□□□□ -1.2
HERC1-213ENST00000561359 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
HERC1-213ENST00000561359 POLRMTO00411 1230 aaKnown RBP7.52□□□□□ -1.21
HERC1-213ENST00000561359 SLC24A1O60721 1099 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 DNAJB2P25686 324 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 ECE1P42892 770 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 RRS1Q15050 365 aaKnown RBP7.52□□□□□ -1.21
HERC1-213ENST00000561359 SLF2Q8IX21 1173 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 SPG7Q9UQ90 795 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.21
HERC1-213ENST00000561359 MAP1SQ66K74 1059 aaPredicted RBP7.51□□□□□ -1.21
HERC1-213ENST00000561359 C2CD5Q86YS7 1000 aa7.51□□□□□ -1.21
HERC1-213ENST00000561359 CNTROBQ8N137 903 aa7.51□□□□□ -1.21
HERC1-213ENST00000561359 NECTIN2Q92692 538 aa7.51□□□□□ -1.21
HERC1-213ENST00000561359 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
HERC1-213ENST00000561359 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
HERC1-213ENST00000561359 MAP2P11137 1827 aaKnown RBP7.5□□□□□ -1.21
HERC1-213ENST00000561359 VIRMAQ69YN4 1812 aaKnown RBP7.5□□□□□ -1.21
HERC1-213ENST00000561359 MON2Q7Z3U7 1717 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 RTL1A6NKG5 1358 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 RAB3GAP2Q9H2M9 1393 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 H0YIN7 160 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 CA12O43570 354 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 C21orf2O43822 256 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 ZPR1O75312 459 aa7.5□□□□□ -1.21
HERC1-213ENST00000561359 OATP04181 439 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms