RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 C2CD5Q86YS7 1000 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 SETDB2Q96T68 719 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 CHL1O00533 1208 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 HOXB7P09629 217 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 RIPK4P57078 832 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 ST5P78524 1137 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 RASSF7Q02833 373 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 HLFQ16534 295 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 BICDL1Q6ZP65 573 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
SPG11-224ENST00000561268 RNF123Q5XPI4 1314 aa9.03□□□□□ -0.96
SPG11-224ENST00000561268 H0YIN7 160 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 ZNF853P0CG23 659 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 LMNB1P20700 586 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 TTLL7Q6ZT98 887 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 ARHGAP27Q6ZUM4 889 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 C7orf43Q8WVR3 580 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 THSD7BQ9C0I4 1608 aa9.02□□□□□ -0.97
SPG11-224ENST00000561268 NTSR2O95665 410 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
SPG11-224ENST00000561268 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
SPG11-224ENST00000561268 ZNF34Q8IZ26 560 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 MASTLQ96GX5 879 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 RNF181Q9P0P0 153 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 ADAMTS8Q9UP79 889 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
SPG11-224ENST00000561268 CEP350Q5VT06 3117 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 SCN9AQ15858 1988 aa9.01□□□□□ -0.97
SPG11-224ENST00000561268 NPR1P16066 1061 aa9□□□□□ -0.97
SPG11-224ENST00000561268 WDR43Q15061 677 aaKnown RBP eCLIP9□□□□□ -0.97
SPG11-224ENST00000561268 PROSER3Q2NL68 480 aa9□□□□□ -0.97
SPG11-224ENST00000561268 SOGA3Q5TF21 947 aa9□□□□□ -0.97
SPG11-224ENST00000561268 POTEGQ6S5H5 508 aa9□□□□□ -0.97
SPG11-224ENST00000561268 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
SPG11-224ENST00000561268 NBPF5PQ86XG9 351 aaPredicted RBP9□□□□□ -0.97
SPG11-224ENST00000561268 CCDC146Q8IYE0 955 aa9□□□□□ -0.97
SPG11-224ENST00000561268 NMRK2Q9NPI5 230 aa9□□□□□ -0.97
SPG11-224ENST00000561268 KDM2BQ8NHM5 1336 aa9□□□□□ -0.97
SPG11-224ENST00000561268 SENP3-EIF4A1A0A087X0R7 540 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 TOMM70O94826 608 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 HSPA6P17066 643 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 HOXA10P31260 410 aaPredicted RBP8.99□□□□□ -0.97
SPG11-224ENST00000561268 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 KIF6Q6ZMV9 814 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
SPG11-224ENST00000561268 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 NYXQ9GZU5 481 aa8.99□□□□□ -0.97
SPG11-224ENST00000561268 DDX21Q9NR30 783 aaKnown RBP eCLIP8.99□□□□□ -0.97
SPG11-224ENST00000561268 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
SPG11-224ENST00000561268 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
SPG11-224ENST00000561268 KRT24Q2M2I5 525 aa8.98□□□□□ -0.97
SPG11-224ENST00000561268 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
SPG11-224ENST00000561268 ZNF526Q8TF50 670 aaPredicted RBP8.98□□□□□ -0.97
SPG11-224ENST00000561268 TAOK3Q9H2K8 898 aa8.98□□□□□ -0.97
SPG11-224ENST00000561268 IFT57Q9NWB7 429 aa8.98□□□□□ -0.97
SPG11-224ENST00000561268 ECM29Q5VYK3 1845 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 C21orf2O43822 256 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 MYL6BP14649 208 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 CCDC27Q2M243 656 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 CCDC184Q52MB2 194 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 CCDC93Q567U6 631 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 ZNF622Q969S3 477 aaKnown RBP eCLIP8.97□□□□□ -0.97
SPG11-224ENST00000561268 ZBTB3Q9H5J0 574 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
SPG11-224ENST00000561268 POTECB2RU33 542 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 APAF1O14727 1248 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 ANXA1P04083 346 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 FKBP4Q02790 459 aaKnown RBP eCLIP8.96□□□□□ -0.98
SPG11-224ENST00000561268 FSTL1Q12841 308 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 ERFEQ4G0M1 354 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 HSP90AB3PQ58FF7 597 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 SLC10A5Q5PT55 438 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 SUSD4Q5VX71 490 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 L3MBTL3Q96JM7 780 aaPredicted RBP8.96□□□□□ -0.98
SPG11-224ENST00000561268 PSMD1Q99460 953 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 CHPF2Q9P2E5 772 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 LAMB1P07942 1786 aa8.96□□□□□ -0.98
SPG11-224ENST00000561268 POLR2AP24928 1970 aaKnown RBP8.95□□□□□ -0.98
SPG11-224ENST00000561268 GPTP24298 496 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 ALDH1B1P30837 517 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 ERICH6BQ5W0A0 696 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 NLRP10Q86W26 655 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 XAGE3Q8WTP9 111 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
SPG11-224ENST00000561268 CRAMP1Q96RY5 1269 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 ISCA1Q9BUE6 129 aa8.95□□□□□ -0.98
SPG11-224ENST00000561268 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
SPG11-224ENST00000561268 NPHP1O15259 732 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 EIF2S2P20042 333 aaKnown RBP8.94□□□□□ -0.98
SPG11-224ENST00000561268 GNAI1P63096 354 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms