RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 KRT24Q2M2I5 525 aa21.32■■□□□ 1
CRTC3-212ENST00000561218 SYNE4Q8N205 404 aa21.32■■□□□ 1
CRTC3-212ENST00000561218 XAGE3Q8WTP9 111 aa21.32■■□□□ 1
CRTC3-212ENST00000561218 UTP14AQ9BVJ6 771 aaKnown RBP21.32■■□□□ 1
CRTC3-212ENST00000561218 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
CRTC3-212ENST00000561218 CC2D2BQ6DHV5 1058 aa21.31■■□□□ 1
CRTC3-212ENST00000561218 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
CRTC3-212ENST00000561218 DDX21Q9NR30 783 aaKnown RBP eCLIP21.31■■□□□ 1
CRTC3-212ENST00000561218 NLRP3Q96P20 1036 aa21.3■■□□□ 1
CRTC3-212ENST00000561218 CRAMP1Q96RY5 1269 aa21.3■■□□□ 1
CRTC3-212ENST00000561218 RIC1Q4ADV7 1423 aa21.29■■□□□ 1
CRTC3-212ENST00000561218 DICER1Q9UPY3 1922 aaKnown RBP21.29■■□□□ 1
CRTC3-212ENST00000561218 IARSP41252 1262 aaKnown RBP21.29■■□□□ 1
CRTC3-212ENST00000561218 WDR90Q96KV7 1748 aa21.29■■□□□ 1
CRTC3-212ENST00000561218 IQCA1LA6NCM1 817 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 GRIPAP1Q4V328 841 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 KLRG1Q96E93 195 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 CFAP44Q96MT7 982 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 PSMD1Q99460 953 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
CRTC3-212ENST00000561218 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
CRTC3-212ENST00000561218 HOXB7P09629 217 aa21.27■■□□□ 1
CRTC3-212ENST00000561218 TCIRG1Q13488 830 aa21.27■■□□□ 1
CRTC3-212ENST00000561218 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
CRTC3-212ENST00000561218 TMX4Q9H1E5 349 aaPredicted RBP21.27■■□□□ 1
CRTC3-212ENST00000561218 APAF1O14727 1248 aa21.26■□□□□ 0.99
CRTC3-212ENST00000561218 PPEF1O14829 653 aaPredicted RBP21.26■□□□□ 0.99
CRTC3-212ENST00000561218 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
CRTC3-212ENST00000561218 JDP2Q8WYK2 163 aa21.26■□□□□ 0.99
CRTC3-212ENST00000561218 L3MBTL3Q96JM7 780 aaPredicted RBP21.26■□□□□ 0.99
CRTC3-212ENST00000561218 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
CRTC3-212ENST00000561218 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
CRTC3-212ENST00000561218 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
CRTC3-212ENST00000561218 TRMT112Q9UI30 125 aaKnown RBP21.25■□□□□ 0.99
CRTC3-212ENST00000561218 ZNF541Q9H0D2 1346 aa21.25■□□□□ 0.99
CRTC3-212ENST00000561218 CALD1Q05682 793 aaKnown RBP21.24■□□□□ 0.99
CRTC3-212ENST00000561218 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
CRTC3-212ENST00000561218 MBIPQ9NS73 344 aa21.24■□□□□ 0.99
CRTC3-212ENST00000561218 FZD9O00144 591 aa21.23■□□□□ 0.99
CRTC3-212ENST00000561218 HCLS1P14317 486 aaPredicted RBP21.23■□□□□ 0.99
CRTC3-212ENST00000561218 ANKRD13DQ6ZTN6 518 aa21.23■□□□□ 0.99
CRTC3-212ENST00000561218 PLBD2Q8NHP8 589 aa21.23■□□□□ 0.99
CRTC3-212ENST00000561218 TAF1DQ9H5J8 278 aaPredicted RBP21.23■□□□□ 0.99
CRTC3-212ENST00000561218 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
CRTC3-212ENST00000561218 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
CRTC3-212ENST00000561218 HYPKQ9NX55 129 aa21.22■□□□□ 0.99
CRTC3-212ENST00000561218 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
CRTC3-212ENST00000561218 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 EIF6P56537 245 aaKnown RBP21.21■□□□□ 0.99
CRTC3-212ENST00000561218 GNAI1P63096 354 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 IFT57Q9NWB7 429 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 HACL1Q9UJ83 578 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 ATP6V0A2Q9Y487 856 aa21.21■□□□□ 0.99
CRTC3-212ENST00000561218 BBOX1O75936 387 aa21.2■□□□□ 0.98
CRTC3-212ENST00000561218 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
CRTC3-212ENST00000561218 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
CRTC3-212ENST00000561218 GPC2Q8N158 579 aa21.2■□□□□ 0.98
CRTC3-212ENST00000561218 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
CRTC3-212ENST00000561218 ABCC4O15439 1325 aa21.2■□□□□ 0.98
CRTC3-212ENST00000561218 ZNF428Q96B54 188 aa21.19■□□□□ 0.98
CRTC3-212ENST00000561218 CLEC11AQ9Y240 323 aa21.19■□□□□ 0.98
CRTC3-212ENST00000561218 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
CRTC3-212ENST00000561218 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
CRTC3-212ENST00000561218 EPHX2P34913 555 aa21.18■□□□□ 0.98
CRTC3-212ENST00000561218 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
CRTC3-212ENST00000561218 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
CRTC3-212ENST00000561218 ATP5J2-PTCD1G3V325 749 aa21.17■□□□□ 0.98
CRTC3-212ENST00000561218 IFFO2Q5TF58 517 aa21.17■□□□□ 0.98
CRTC3-212ENST00000561218 PNMA8AQ86V59 439 aaPredicted RBP21.17■□□□□ 0.98
CRTC3-212ENST00000561218 NIM1KQ8IY84 436 aa21.17■□□□□ 0.98
CRTC3-212ENST00000561218 ISCA1Q9BUE6 129 aa21.17■□□□□ 0.98
CRTC3-212ENST00000561218 PPIP5K2O43314 1243 aa21.16■□□□□ 0.98
CRTC3-212ENST00000561218 SP8Q8IXZ3 490 aa21.16■□□□□ 0.98
CRTC3-212ENST00000561218 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
CRTC3-212ENST00000561218 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 DPP8Q6V1X1 898 aaPredicted RBP21.15■□□□□ 0.98
CRTC3-212ENST00000561218 RIC3Q7Z5B4 369 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 VPS33BQ9H267 617 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 CREBZFQ9NS37 354 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 SCN4AP35499 1836 aa21.15■□□□□ 0.98
CRTC3-212ENST00000561218 LMOD1P29536 600 aaPredicted RBP21.14■□□□□ 0.97
CRTC3-212ENST00000561218 GRAPQ13588 217 aa21.14■□□□□ 0.97
CRTC3-212ENST00000561218 AOC3Q16853 763 aa21.14■□□□□ 0.97
CRTC3-212ENST00000561218 MPNDQ8N594 471 aa21.14■□□□□ 0.97
CRTC3-212ENST00000561218 GRAPLQ8TC17 118 aaPredicted RBP21.14■□□□□ 0.97
CRTC3-212ENST00000561218 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
CRTC3-212ENST00000561218 ANKRD36CQ5JPF3 1778 aa21.13■□□□□ 0.97
CRTC3-212ENST00000561218 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
CRTC3-212ENST00000561218 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
CRTC3-212ENST00000561218 C8orf58Q8NAV2 365 aa21.13■□□□□ 0.97
CRTC3-212ENST00000561218 COL4A5P29400 1685 aa21.12■□□□□ 0.97
CRTC3-212ENST00000561218 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
CRTC3-212ENST00000561218 TMC4Q7Z404 712 aa21.12■□□□□ 0.97
CRTC3-212ENST00000561218 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms