RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 CDC37L1Q7L3B6 337 aa18.91■□□□□ 0.62
PBX1-219ENST00000560641 VGLL3A8MV65 326 aa18.9■□□□□ 0.62
PBX1-219ENST00000560641 COG3Q96JB2 828 aa18.9■□□□□ 0.62
PBX1-219ENST00000560641 OVOS2A0A0J9YW53 1432 aa18.9■□□□□ 0.62
PBX1-219ENST00000560641 OVOS2Q6IE36 1432 aa18.9■□□□□ 0.62
PBX1-219ENST00000560641 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
PBX1-219ENST00000560641 ANKRD1Q15327 319 aa18.89■□□□□ 0.62
PBX1-219ENST00000560641 CAMK4Q16566 473 aa18.89■□□□□ 0.62
PBX1-219ENST00000560641 SPATA32Q96LK8 384 aa18.89■□□□□ 0.62
PBX1-219ENST00000560641 F6X3S4 739 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 CLCN6P51797 869 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.61
PBX1-219ENST00000560641 STX1AQ16623 288 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 DNAJC25Q9H1X3 360 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 YY1AP1Q9H869 796 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 V9GYY5 206 aaPredicted RBP18.89■□□□□ 0.61
PBX1-219ENST00000560641 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.61
PBX1-219ENST00000560641 VPS37CA5D8V6 355 aaPredicted RBP18.89■□□□□ 0.61
PBX1-219ENST00000560641 CCDC69A6NI79 296 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 TPM4P67936 248 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 RAD51AP2Q09MP3 1159 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 NME9Q86XW9 330 aa18.89■□□□□ 0.61
PBX1-219ENST00000560641 FILIP1Q7Z7B0 1213 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 PGBD1Q96JS3 809 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 KDRP35968 1356 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 NR1I2O75469 434 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 TEX35Q5T0J7 233 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
PBX1-219ENST00000560641 PSD3Q9NYI0 1048 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 PHLPP2Q6ZVD8 1323 aa18.88■□□□□ 0.61
PBX1-219ENST00000560641 FLIIQ13045 1269 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
PBX1-219ENST00000560641 RHPN1Q8TCX5 695 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 TPCN1Q9ULQ1 816 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 USP44Q9H0E7 712 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 ST7Q9NRC1 585 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 TPM1P09493 284 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 ADCK5Q3MIX3 580 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 GGT6Q6P531 493 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 MCM10Q7L590 875 aa18.87■□□□□ 0.61
PBX1-219ENST00000560641 JAKMIP1Q96N16 626 aaKnown RBP18.87■□□□□ 0.61
PBX1-219ENST00000560641 LRRFIP2Q9Y608 721 aaKnown RBP18.87■□□□□ 0.61
PBX1-219ENST00000560641 ABCC6O95255 1503 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 GOLGA6L19H0YKK7 550 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 TSGA10IPQ3SY00 556 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 DHX40Q8IX18 779 aaKnown RBP18.86■□□□□ 0.61
PBX1-219ENST00000560641 IQUBQ8NA54 791 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 ZNF592Q92610 1267 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 BPIFA3Q9BQP9 254 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
PBX1-219ENST00000560641 CCDC150Q8NCX0 1101 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
PBX1-219ENST00000560641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.85■□□□□ 0.61
PBX1-219ENST00000560641 TECPR2O15040 1411 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 PSMA5P28066 241 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 CCDC30Q5VVM6 783 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 ARGLU1Q9NWB6 273 aaPredicted RBP18.85■□□□□ 0.61
PBX1-219ENST00000560641 ERICH4A6NGS2 130 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 SNW1Q13573 536 aaKnown RBP18.85■□□□□ 0.61
PBX1-219ENST00000560641 HSP90AB4PQ58FF6 505 aa18.85■□□□□ 0.61
PBX1-219ENST00000560641 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
PBX1-219ENST00000560641 GOLGA6L4A6NEF3 574 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 RESTQ13127 1097 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 E4F1Q66K89 784 aaPredicted RBP18.84■□□□□ 0.61
PBX1-219ENST00000560641 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 ZSCAN16Q9H4T2 348 aaPredicted RBP18.84■□□□□ 0.61
PBX1-219ENST00000560641 NEO1Q92859 1461 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 MAP4K1Q92918 833 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 PPP1R13BQ96KQ4 1090 aa18.84■□□□□ 0.61
PBX1-219ENST00000560641 ORC3Q9UBD5 711 aaPredicted RBP18.84■□□□□ 0.61
PBX1-219ENST00000560641 PTH1RQ03431 593 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 ATL3Q6DD88 541 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 CTR9Q6PD62 1173 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 CCP110O43303 1012 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 ARID5BQ14865 1188 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 C11orf57Q6ZUT1 292 aaPredicted RBP18.83■□□□□ 0.61
PBX1-219ENST00000560641 NBPF11Q86T75 865 aa18.83■□□□□ 0.61
PBX1-219ENST00000560641 RIMS1Q86UR5 1692 aaKnown RBP18.83■□□□□ 0.6
PBX1-219ENST00000560641 TSPOAP1O95153 1857 aa18.83■□□□□ 0.6
PBX1-219ENST00000560641 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.6
PBX1-219ENST00000560641 ZKSCAN1P17029 563 aaPredicted RBP18.83■□□□□ 0.6
PBX1-219ENST00000560641 NUTM1Q86Y26 1132 aa18.83■□□□□ 0.6
PBX1-219ENST00000560641 ERCC6LQ2NKX8 1250 aa18.82■□□□□ 0.6
PBX1-219ENST00000560641 CPA1P15085 419 aa18.82■□□□□ 0.6
PBX1-219ENST00000560641 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
PBX1-219ENST00000560641 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
PBX1-219ENST00000560641 UBTFL1P0CB47 393 aaPredicted RBP18.81■□□□□ 0.6
PBX1-219ENST00000560641 RRS1Q15050 365 aaKnown RBP18.81■□□□□ 0.6
PBX1-219ENST00000560641 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 CWC27Q6UX04 472 aaKnown RBP18.81■□□□□ 0.6
PBX1-219ENST00000560641 ANO10Q9NW15 660 aa18.81■□□□□ 0.6
PBX1-219ENST00000560641 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms