RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 ABCC12Q96J65 1359 aa24.22■■□□□ 1.47
TPM1-224ENST00000560615 HACL1Q9UJ83 578 aa24.22■■□□□ 1.47
TPM1-224ENST00000560615 RNF123Q5XPI4 1314 aa24.21■■□□□ 1.47
TPM1-224ENST00000560615 UBN2Q6ZU65 1347 aa24.21■■□□□ 1.47
TPM1-224ENST00000560615 EIF6P56537 245 aaKnown RBP24.21■■□□□ 1.47
TPM1-224ENST00000560615 NEUROD2Q15784 382 aa24.21■■□□□ 1.47
TPM1-224ENST00000560615 PNMA8AQ86V59 439 aaPredicted RBP24.21■■□□□ 1.47
TPM1-224ENST00000560615 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
TPM1-224ENST00000560615 TAF1DQ9H5J8 278 aaPredicted RBP24.21■■□□□ 1.47
TPM1-224ENST00000560615 CREBZFQ9NS37 354 aa24.21■■□□□ 1.47
TPM1-224ENST00000560615 NTSR2O95665 410 aa24.2■■□□□ 1.46
TPM1-224ENST00000560615 OLFM4Q6UX06 510 aa24.2■■□□□ 1.46
TPM1-224ENST00000560615 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
TPM1-224ENST00000560615 FZD9O00144 591 aa24.19■■□□□ 1.46
TPM1-224ENST00000560615 GPC2Q8N158 579 aa24.19■■□□□ 1.46
TPM1-224ENST00000560615 CACNA1SQ13698 1873 aa24.18■■□□□ 1.46
TPM1-224ENST00000560615 PPEF1O14829 653 aaPredicted RBP24.18■■□□□ 1.46
TPM1-224ENST00000560615 PDIA6Q15084 440 aa24.18■■□□□ 1.46
TPM1-224ENST00000560615 EAPPQ56P03 285 aaPredicted RBP24.18■■□□□ 1.46
TPM1-224ENST00000560615 CLEC11AQ9Y240 323 aa24.18■■□□□ 1.46
TPM1-224ENST00000560615 ZNF541Q9H0D2 1346 aa24.17■■□□□ 1.46
TPM1-224ENST00000560615 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
TPM1-224ENST00000560615 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
TPM1-224ENST00000560615 EPHX2P34913 555 aa24.16■■□□□ 1.46
TPM1-224ENST00000560615 AIMP1Q12904 312 aaKnown RBP24.16■■□□□ 1.46
TPM1-224ENST00000560615 SLC10A5Q5PT55 438 aa24.16■■□□□ 1.46
TPM1-224ENST00000560615 COPS6Q7L5N1 327 aa24.16■■□□□ 1.46
TPM1-224ENST00000560615 LARGE2Q8N3Y3 721 aa24.16■■□□□ 1.46
TPM1-224ENST00000560615 VPS33BQ9H267 617 aa24.16■■□□□ 1.46
TPM1-224ENST00000560615 DDX21Q9NR30 783 aaKnown RBP eCLIP24.16■■□□□ 1.46
TPM1-224ENST00000560615 CHL1O00533 1208 aa24.15■■□□□ 1.46
TPM1-224ENST00000560615 POTEIP0CG38 1075 aa24.15■■□□□ 1.46
TPM1-224ENST00000560615 POTEJP0CG39 1038 aa24.15■■□□□ 1.46
TPM1-224ENST00000560615 LMOD1P29536 600 aaPredicted RBP24.15■■□□□ 1.46
TPM1-224ENST00000560615 LRP10Q7Z4F1 713 aa24.15■■□□□ 1.46
TPM1-224ENST00000560615 SUPT20HQ8NEM7 779 aa24.15■■□□□ 1.46
TPM1-224ENST00000560615 XAGE3Q8WTP9 111 aa24.14■■□□□ 1.45
TPM1-224ENST00000560615 NECTIN2Q92692 538 aa24.14■■□□□ 1.45
TPM1-224ENST00000560615 NUP98P52948 1817 aa24.14■■□□□ 1.45
TPM1-224ENST00000560615 HOXB7P09629 217 aa24.13■■□□□ 1.45
TPM1-224ENST00000560615 NIM1KQ8IY84 436 aa24.13■■□□□ 1.45
TPM1-224ENST00000560615 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
TPM1-224ENST00000560615 BBOX1O75936 387 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 ANXA1P04083 346 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 TCIRG1Q13488 830 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 PROSER3Q2NL68 480 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 TRMT112Q9UI30 125 aaKnown RBP24.12■■□□□ 1.45
TPM1-224ENST00000560615 ATP6V0A2Q9Y487 856 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 GJA3Q9Y6H8 435 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 SCN4AP35499 1836 aa24.12■■□□□ 1.45
TPM1-224ENST00000560615 HSPA1AP0DMV8 641 aaKnown RBP24.11■■□□□ 1.45
TPM1-224ENST00000560615 HSPA1BP0DMV9 641 aaKnown RBP24.11■■□□□ 1.45
TPM1-224ENST00000560615 HDGFL1Q5TGJ6 251 aa24.11■■□□□ 1.45
TPM1-224ENST00000560615 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
TPM1-224ENST00000560615 TMEM88BA6NKF7 163 aa24.1■■□□□ 1.45
TPM1-224ENST00000560615 DDX46Q7L014 1031 aaKnown RBP24.1■■□□□ 1.45
TPM1-224ENST00000560615 NLRP10Q86W26 655 aa24.1■■□□□ 1.45
TPM1-224ENST00000560615 DBF4Q9UBU7 674 aaPredicted RBP24.1■■□□□ 1.45
TPM1-224ENST00000560615 MKRN1Q9UHC7 482 aaKnown RBP24.1■■□□□ 1.45
TPM1-224ENST00000560615 ADAMTS8Q9UP79 889 aa24.1■■□□□ 1.45
TPM1-224ENST00000560615 SH3TC1Q8TE82 1336 aa24.1■■□□□ 1.45
TPM1-224ENST00000560615 PPIP5K2O43314 1243 aa24.09■■□□□ 1.45
TPM1-224ENST00000560615 CALD1Q05682 793 aaKnown RBP24.09■■□□□ 1.45
TPM1-224ENST00000560615 TRIM35Q9UPQ4 493 aa24.09■■□□□ 1.45
TPM1-224ENST00000560615 SNED1Q8TER0 1413 aa24.09■■□□□ 1.45
TPM1-224ENST00000560615 CNTROBQ8N137 903 aa24.08■■□□□ 1.45
TPM1-224ENST00000560615 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
TPM1-224ENST00000560615 ITGBL1O95965 494 aaPredicted RBP24.07■■□□□ 1.44
TPM1-224ENST00000560615 COL13A1Q5TAT6 717 aaPredicted RBP24.07■■□□□ 1.44
TPM1-224ENST00000560615 DPP8Q6V1X1 898 aaPredicted RBP24.07■■□□□ 1.44
TPM1-224ENST00000560615 C3orf67Q6ZVT6 689 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 TMC4Q7Z404 712 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 SP8Q8IXZ3 490 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 PLBD2Q8NHP8 589 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 HYPKQ9NX55 129 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 CHPF2Q9P2E5 772 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 ABCC4O15439 1325 aa24.07■■□□□ 1.44
TPM1-224ENST00000560615 ANKRD13DQ6ZTN6 518 aa24.06■■□□□ 1.44
TPM1-224ENST00000560615 TNS4Q8IZW8 715 aa24.06■■□□□ 1.44
TPM1-224ENST00000560615 MPNDQ8N594 471 aa24.06■■□□□ 1.44
TPM1-224ENST00000560615 CHMP4AQ9BY43 222 aa24.06■■□□□ 1.44
TPM1-224ENST00000560615 HCLS1P14317 486 aaPredicted RBP24.05■■□□□ 1.44
TPM1-224ENST00000560615 CNTNAP1P78357 1384 aa24.04■■□□□ 1.44
TPM1-224ENST00000560615 GRAPQ13588 217 aa24.04■■□□□ 1.44
TPM1-224ENST00000560615 AOC3Q16853 763 aa24.04■■□□□ 1.44
TPM1-224ENST00000560615 KRT24Q2M2I5 525 aa24.04■■□□□ 1.44
TPM1-224ENST00000560615 USP50Q70EL3 339 aaPredicted RBP24.04■■□□□ 1.44
TPM1-224ENST00000560615 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
TPM1-224ENST00000560615 RTFDC1Q9BY42 306 aaPredicted RBP24.04■■□□□ 1.44
TPM1-224ENST00000560615 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
TPM1-224ENST00000560615 ZNRF3Q9ULT6 936 aa24.04■■□□□ 1.44
TPM1-224ENST00000560615 MAP1SQ66K74 1059 aaPredicted RBP24.03■■□□□ 1.44
TPM1-224ENST00000560615 HSP90B1P14625 803 aaKnown RBP24.02■■□□□ 1.44
TPM1-224ENST00000560615 DUSP27Q5VZP5 1158 aa24.02■■□□□ 1.44
TPM1-224ENST00000560615 GNAI1P63096 354 aa24.01■■□□□ 1.43
TPM1-224ENST00000560615 AIDAQ96BJ3 306 aa24.01■■□□□ 1.43
TPM1-224ENST00000560615 SCNN1DP51172 638 aa24■■□□□ 1.43
TPM1-224ENST00000560615 TNIP1Q15025 636 aa24■■□□□ 1.43
TPM1-224ENST00000560615 DEFB115Q30KQ5 88 aa24■■□□□ 1.43
TPM1-224ENST00000560615 EPS15P42566 896 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms