RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
TNFAIP2-207ENST00000560562 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
TNFAIP2-207ENST00000560562 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 GNAI1P63096 354 aa18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 NLRP10Q86W26 655 aa18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 RRAGCQ9HB90 399 aa18.22■□□□□ 0.51
TNFAIP2-207ENST00000560562 KDM2BQ8NHM5 1336 aa18.21■□□□□ 0.51
TNFAIP2-207ENST00000560562 ANP32CO43423 234 aa18.21■□□□□ 0.51
TNFAIP2-207ENST00000560562 COL4A1P02462 1669 aa18.21■□□□□ 0.5
TNFAIP2-207ENST00000560562 COL4A5P29400 1685 aa18.21■□□□□ 0.5
TNFAIP2-207ENST00000560562 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 TOMM70O94826 608 aa18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 TCIRG1Q13488 830 aa18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 PPP1R42Q7Z4L9 355 aa18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
TNFAIP2-207ENST00000560562 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
TNFAIP2-207ENST00000560562 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
TNFAIP2-207ENST00000560562 UTP14AQ9BVJ6 771 aaKnown RBP18.19■□□□□ 0.5
TNFAIP2-207ENST00000560562 POTECB2RU33 542 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 HSPA6P17066 643 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
TNFAIP2-207ENST00000560562 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
TNFAIP2-207ENST00000560562 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
TNFAIP2-207ENST00000560562 RPGRQ92834 1020 aaKnown RBP18.17■□□□□ 0.5
TNFAIP2-207ENST00000560562 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
TNFAIP2-207ENST00000560562 PCNTO95613 3336 aa18.17■□□□□ 0.5
TNFAIP2-207ENST00000560562 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 LRRC37AA6NMS7 1700 aa18.16■□□□□ 0.5
TNFAIP2-207ENST00000560562 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 CRAMP1Q96RY5 1269 aa18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 SCN4AP35499 1836 aa18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 TRMT112Q9UI30 125 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-207ENST00000560562 ABCC4O15439 1325 aa18.14■□□□□ 0.49
TNFAIP2-207ENST00000560562 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
TNFAIP2-207ENST00000560562 RTKN2Q8IZC4 609 aa18.14■□□□□ 0.49
TNFAIP2-207ENST00000560562 RBM17Q96I25 401 aaKnown RBP18.14■□□□□ 0.49
TNFAIP2-207ENST00000560562 NLRP3Q96P20 1036 aa18.14■□□□□ 0.49
TNFAIP2-207ENST00000560562 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
TNFAIP2-207ENST00000560562 ZNF541Q9H0D2 1346 aa18.13■□□□□ 0.49
TNFAIP2-207ENST00000560562 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
TNFAIP2-207ENST00000560562 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
TNFAIP2-207ENST00000560562 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
TNFAIP2-207ENST00000560562 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
TNFAIP2-207ENST00000560562 PSMD1Q99460 953 aa18.12■□□□□ 0.49
TNFAIP2-207ENST00000560562 DUOX1Q9NRD9 1551 aa18.12■□□□□ 0.49
TNFAIP2-207ENST00000560562 MYH3P11055 1940 aa18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 IL16Q14005 1332 aa18.11■□□□□ 0.49
TNFAIP2-207ENST00000560562 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
TNFAIP2-207ENST00000560562 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
TNFAIP2-207ENST00000560562 DPY19L2Q6NUT2 758 aa18.1■□□□□ 0.49
TNFAIP2-207ENST00000560562 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
TNFAIP2-207ENST00000560562 FANCIQ9NVI1 1328 aa18.1■□□□□ 0.49
TNFAIP2-207ENST00000560562 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 TRIM28Q13263 835 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 ADAMTSL1Q8N6G6 1762 aa18.09■□□□□ 0.49
TNFAIP2-207ENST00000560562 POTEIP0CG38 1075 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 POTEJP0CG39 1038 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 HTRA3P83110 453 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 CCDC30Q5VVM6 783 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 MYD88Q99836 296 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.49
TNFAIP2-207ENST00000560562 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
TNFAIP2-207ENST00000560562 FZD9O00144 591 aa18.07■□□□□ 0.48
TNFAIP2-207ENST00000560562 FSTL1Q12841 308 aa18.07■□□□□ 0.48
TNFAIP2-207ENST00000560562 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
TNFAIP2-207ENST00000560562 G2E3Q7L622 706 aa18.07■□□□□ 0.48
TNFAIP2-207ENST00000560562 L3MBTL3Q96JM7 780 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 APLP1P51693 650 aa18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 GRAPQ13588 217 aa18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 SMC1BQ8NDV3 1235 aa18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 JARID2Q92833 1246 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP2-207ENST00000560562 IRS4O14654 1257 aaPredicted RBP18.05■□□□□ 0.48
TNFAIP2-207ENST00000560562 SF3B3Q15393 1217 aaKnown RBP18.05■□□□□ 0.48
TNFAIP2-207ENST00000560562 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms