RNA–Protein interactions for RNA: ENST00000560300.1

RORA-213, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-213ENST00000560300 SYNE4Q8N205 404 aa22.69■■□□□ 1.22
RORA-213ENST00000560300 RPGRQ92834 1020 aaKnown RBP22.69■■□□□ 1.22
RORA-213ENST00000560300 PCNTO95613 3336 aa22.68■■□□□ 1.22
RORA-213ENST00000560300 C3orf67Q6ZVT6 689 aa22.68■■□□□ 1.22
RORA-213ENST00000560300 ANKRD36CQ5JPF3 1778 aa22.68■■□□□ 1.22
RORA-213ENST00000560300 IQCA1LA6NCM1 817 aa22.67■■□□□ 1.22
RORA-213ENST00000560300 SLC51AQ86UW1 340 aa22.67■■□□□ 1.22
RORA-213ENST00000560300 PSMD1Q99460 953 aa22.67■■□□□ 1.22
RORA-213ENST00000560300 TAF1DQ9H5J8 278 aaPredicted RBP22.67■■□□□ 1.22
RORA-213ENST00000560300 COL4A5P29400 1685 aa22.67■■□□□ 1.22
RORA-213ENST00000560300 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
RORA-213ENST00000560300 PARP10Q53GL7 1025 aa22.66■■□□□ 1.22
RORA-213ENST00000560300 PPP1R42Q7Z4L9 355 aa22.66■■□□□ 1.22
RORA-213ENST00000560300 FZD9O00144 591 aa22.65■■□□□ 1.22
RORA-213ENST00000560300 KRT24Q2M2I5 525 aa22.65■■□□□ 1.22
RORA-213ENST00000560300 CC2D2BQ6DHV5 1058 aa22.65■■□□□ 1.22
RORA-213ENST00000560300 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
RORA-213ENST00000560300 TRIM35Q9UPQ4 493 aa22.65■■□□□ 1.22
RORA-213ENST00000560300 LDHDQ86WU2 507 aa22.64■■□□□ 1.21
RORA-213ENST00000560300 RBM17Q96I25 401 aaKnown RBP22.64■■□□□ 1.21
RORA-213ENST00000560300 CRAMP1Q96RY5 1269 aa22.64■■□□□ 1.21
RORA-213ENST00000560300 ADAMTSL1Q8N6G6 1762 aa22.63■■□□□ 1.21
RORA-213ENST00000560300 CHL1O00533 1208 aa22.63■■□□□ 1.21
RORA-213ENST00000560300 COPS6Q7L5N1 327 aa22.63■■□□□ 1.21
RORA-213ENST00000560300 RUNDC1Q96C34 613 aa22.63■■□□□ 1.21
RORA-213ENST00000560300 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
RORA-213ENST00000560300 LAMB2P55268 1798 aa22.63■■□□□ 1.21
RORA-213ENST00000560300 PPEF1O14829 653 aaPredicted RBP22.62■■□□□ 1.21
RORA-213ENST00000560300 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
RORA-213ENST00000560300 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
RORA-213ENST00000560300 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
RORA-213ENST00000560300 TCERG1O14776 1098 aaKnown RBP22.61■■□□□ 1.21
RORA-213ENST00000560300 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
RORA-213ENST00000560300 SLC10A5Q5PT55 438 aa22.61■■□□□ 1.21
RORA-213ENST00000560300 DDX21Q9NR30 783 aaKnown RBP eCLIP22.61■■□□□ 1.21
RORA-213ENST00000560300 CREBZFQ9NS37 354 aa22.61■■□□□ 1.21
RORA-213ENST00000560300 HACL1Q9UJ83 578 aa22.61■■□□□ 1.21
RORA-213ENST00000560300 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
RORA-213ENST00000560300 LAS1LQ9Y4W2 734 aaKnown RBP22.61■■□□□ 1.21
RORA-213ENST00000560300 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
RORA-213ENST00000560300 EPHX2P34913 555 aa22.6■■□□□ 1.21
RORA-213ENST00000560300 EAPPQ56P03 285 aaPredicted RBP22.6■■□□□ 1.21
RORA-213ENST00000560300 GPC2Q8N158 579 aa22.6■■□□□ 1.21
RORA-213ENST00000560300 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
RORA-213ENST00000560300 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
RORA-213ENST00000560300 GRIPAP1Q4V328 841 aa22.59■■□□□ 1.21
RORA-213ENST00000560300 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
RORA-213ENST00000560300 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
RORA-213ENST00000560300 LTBP1Q14766 1721 aa22.58■■□□□ 1.21
RORA-213ENST00000560300 COL13A1Q5TAT6 717 aaPredicted RBP22.58■■□□□ 1.21
RORA-213ENST00000560300 CHPF2Q9P2E5 772 aa22.58■■□□□ 1.21
RORA-213ENST00000560300 ABCC4O15439 1325 aa22.57■■□□□ 1.2
RORA-213ENST00000560300 HSPA1AP0DMV8 641 aaKnown RBP22.57■■□□□ 1.2
RORA-213ENST00000560300 HSPA1BP0DMV9 641 aaKnown RBP22.57■■□□□ 1.2
RORA-213ENST00000560300 TCIRG1Q13488 830 aa22.57■■□□□ 1.2
RORA-213ENST00000560300 ITGBL1O95965 494 aaPredicted RBP22.56■■□□□ 1.2
RORA-213ENST00000560300 HCLS1P14317 486 aaPredicted RBP22.56■■□□□ 1.2
RORA-213ENST00000560300 EIF6P56537 245 aaKnown RBP22.56■■□□□ 1.2
RORA-213ENST00000560300 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
RORA-213ENST00000560300 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
RORA-213ENST00000560300 MKRN1Q9UHC7 482 aaKnown RBP22.56■■□□□ 1.2
RORA-213ENST00000560300 ATP6V0A2Q9Y487 856 aa22.56■■□□□ 1.2
RORA-213ENST00000560300 HDGFL1Q5TGJ6 251 aa22.55■■□□□ 1.2
RORA-213ENST00000560300 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
RORA-213ENST00000560300 GJA3Q9Y6H8 435 aa22.55■■□□□ 1.2
RORA-213ENST00000560300 HOXB7P09629 217 aa22.54■■□□□ 1.2
RORA-213ENST00000560300 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
RORA-213ENST00000560300 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
RORA-213ENST00000560300 SH3TC1Q8TE82 1336 aa22.54■■□□□ 1.2
RORA-213ENST00000560300 TAF1P21675 1872 aa22.54■■□□□ 1.2
RORA-213ENST00000560300 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
RORA-213ENST00000560300 PPIP5K2O43314 1243 aa22.53■■□□□ 1.2
RORA-213ENST00000560300 CFAP44Q96MT7 982 aa22.53■■□□□ 1.2
RORA-213ENST00000560300 DDX60Q8IY21 1712 aaKnown RBP22.53■■□□□ 1.2
RORA-213ENST00000560300 SCNN1DP51172 638 aa22.52■■□□□ 1.2
RORA-213ENST00000560300 AOC3Q16853 763 aa22.52■■□□□ 1.2
RORA-213ENST00000560300 MAP1SQ66K74 1059 aaPredicted RBP22.52■■□□□ 1.2
RORA-213ENST00000560300 NIM1KQ8IY84 436 aa22.52■■□□□ 1.2
RORA-213ENST00000560300 ZNF428Q96B54 188 aa22.52■■□□□ 1.2
RORA-213ENST00000560300 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
RORA-213ENST00000560300 TMX4Q9H1E5 349 aaPredicted RBP22.51■■□□□ 1.19
RORA-213ENST00000560300 MBIPQ9NS73 344 aa22.51■■□□□ 1.19
RORA-213ENST00000560300 DBF4Q9UBU7 674 aaPredicted RBP22.51■■□□□ 1.19
RORA-213ENST00000560300 TMEM88BA6NKF7 163 aa22.5■■□□□ 1.19
RORA-213ENST00000560300 BBOX1O75936 387 aa22.5■■□□□ 1.19
RORA-213ENST00000560300 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
RORA-213ENST00000560300 CNTROBQ8N137 903 aa22.5■■□□□ 1.19
RORA-213ENST00000560300 RTFDC1Q9BY42 306 aaPredicted RBP22.5■■□□□ 1.19
RORA-213ENST00000560300 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
RORA-213ENST00000560300 EPS15P42566 896 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 DDX46Q7L014 1031 aaKnown RBP22.49■■□□□ 1.19
RORA-213ENST00000560300 SP8Q8IXZ3 490 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 ISCA1Q9BUE6 129 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 VPS33BQ9H267 617 aa22.49■■□□□ 1.19
RORA-213ENST00000560300 LRRC37AA6NMS7 1700 aa22.48■■□□□ 1.19
RORA-213ENST00000560300 APAF1O14727 1248 aa22.48■■□□□ 1.19
RORA-213ENST00000560300 GRAPQ13588 217 aa22.48■■□□□ 1.19
RORA-213ENST00000560300 DPP8Q6V1X1 898 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms