RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
AC104041.1-201ENST00000560054 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
AC104041.1-201ENST00000560054 PPP1R42Q7Z4L9 355 aa12.67□□□□□ -0.38
AC104041.1-201ENST00000560054 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
AC104041.1-201ENST00000560054 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
AC104041.1-201ENST00000560054 HSPA6P17066 643 aa12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 GNAI1P63096 354 aa12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
AC104041.1-201ENST00000560054 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 ANP32CO43423 234 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 FER1L6Q2WGJ9 1857 aa12.65□□□□□ -0.38
AC104041.1-201ENST00000560054 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 NLRP10Q86W26 655 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 RPGRQ92834 1020 aaKnown RBP12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
AC104041.1-201ENST00000560054 ELL2O00472 640 aaPredicted RBP12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 NLRP3Q96P20 1036 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
AC104041.1-201ENST00000560054 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 CCDC88AQ3V6T2 1871 aa12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 POTECB2RU33 542 aa12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
AC104041.1-201ENST00000560054 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 ISCA1Q9BUE6 129 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
AC104041.1-201ENST00000560054 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 FSTL1Q12841 308 aa12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 PSMD1Q99460 953 aa12.6□□□□□ -0.39
AC104041.1-201ENST00000560054 DICER1Q9UPY3 1922 aaKnown RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 CAPN15O75808 1086 aa12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 APLP1P51693 650 aa12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
AC104041.1-201ENST00000560054 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 SLC51AQ86UW1 340 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 ANKRD36CQ5JPF3 1778 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 ABCC4O15439 1325 aa12.58□□□□□ -0.4
AC104041.1-201ENST00000560054 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 FZD9O00144 591 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 BBOX1O75936 387 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 IL16Q14005 1332 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 ZNF541Q9H0D2 1346 aa12.57□□□□□ -0.4
AC104041.1-201ENST00000560054 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
AC104041.1-201ENST00000560054 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
AC104041.1-201ENST00000560054 GRAPQ13588 217 aa12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 TWISTNBQ3B726 338 aaPredicted RBP12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 SP8Q8IXZ3 490 aa12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 GRAPLQ8TC17 118 aaPredicted RBP12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 TMX4Q9H1E5 349 aaPredicted RBP12.55□□□□□ -0.4
AC104041.1-201ENST00000560054 IQCA1LA6NCM1 817 aa12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
AC104041.1-201ENST00000560054 MYD88Q99836 296 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms