RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
RORA-207ENST00000558234 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
RORA-207ENST00000558234 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
RORA-207ENST00000558234 CLUAP1Q96AJ1 413 aa14.59□□□□□ -0.07
RORA-207ENST00000558234 ABCC12Q96J65 1359 aa14.58□□□□□ -0.07
RORA-207ENST00000558234 FER1L6Q2WGJ9 1857 aa14.58□□□□□ -0.07
RORA-207ENST00000558234 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
RORA-207ENST00000558234 COG6Q9Y2V7 657 aa14.58□□□□□ -0.08
RORA-207ENST00000558234 NFIXQ14938 502 aa14.58□□□□□ -0.08
RORA-207ENST00000558234 DNAAF4Q8WXU2 420 aa14.58□□□□□ -0.08
RORA-207ENST00000558234 CDHR2Q9BYE9 1310 aa14.58□□□□□ -0.08
RORA-207ENST00000558234 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
RORA-207ENST00000558234 H7C1W4 665 aa14.57□□□□□ -0.08
RORA-207ENST00000558234 R3HDM1Q15032 1099 aaKnown RBP14.57□□□□□ -0.08
RORA-207ENST00000558234 SLC10A5Q5PT55 438 aa14.57□□□□□ -0.08
RORA-207ENST00000558234 PLA2G12BQ9BX93 195 aa14.57□□□□□ -0.08
RORA-207ENST00000558234 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
RORA-207ENST00000558234 LINS1Q8NG48 757 aa14.56□□□□□ -0.08
RORA-207ENST00000558234 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
RORA-207ENST00000558234 ALDH1L1O75891 902 aa14.56□□□□□ -0.08
RORA-207ENST00000558234 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
RORA-207ENST00000558234 PHF14O94880 888 aa14.56□□□□□ -0.08
RORA-207ENST00000558234 F6X3S4 739 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
RORA-207ENST00000558234 SUSD4Q5VX71 490 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 CCDC191Q8NCU4 936 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 ZBTB3Q9H5J0 574 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 RFC4P35249 363 aa14.55□□□□□ -0.08
RORA-207ENST00000558234 SLX4Q8IY92 1834 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 MS4A1P11836 297 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 HDAC1Q13547 482 aaPredicted RBP14.54□□□□□ -0.08
RORA-207ENST00000558234 GCKRQ14397 625 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 PSME4Q14997 1843 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 FRAT1Q92837 279 aaPredicted RBP14.54□□□□□ -0.08
RORA-207ENST00000558234 NLGN1Q8N2Q7 840 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
RORA-207ENST00000558234 IPO8O15397 1037 aaKnown RBP14.53□□□□□ -0.08
RORA-207ENST00000558234 DDX58O95786 925 aaKnown RBP14.53□□□□□ -0.08
RORA-207ENST00000558234 CRY2Q49AN0 593 aa14.53□□□□□ -0.08
RORA-207ENST00000558234 PARP10Q53GL7 1025 aa14.53□□□□□ -0.08
RORA-207ENST00000558234 CENPQQ7L2Z9 268 aaPredicted RBP14.53□□□□□ -0.08
RORA-207ENST00000558234 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
RORA-207ENST00000558234 PCCAP05165 728 aaPredicted RBP14.53□□□□□ -0.08
RORA-207ENST00000558234 FKBP5Q13451 457 aaPredicted RBP14.53□□□□□ -0.08
RORA-207ENST00000558234 SIRT2Q8IXJ6 389 aa14.53□□□□□ -0.08
RORA-207ENST00000558234 DDX19BQ9UMR2 479 aa14.53□□□□□ -0.08
RORA-207ENST00000558234 AIMP1Q12904 312 aaKnown RBP14.52□□□□□ -0.08
RORA-207ENST00000558234 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.08
RORA-207ENST00000558234 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.08
RORA-207ENST00000558234 CCT4P50991 539 aaKnown RBP14.52□□□□□ -0.09
RORA-207ENST00000558234 ZBTB38Q8NAP3 1195 aaPredicted RBP14.52□□□□□ -0.09
RORA-207ENST00000558234 ZNF652Q9Y2D9 606 aa14.52□□□□□ -0.09
RORA-207ENST00000558234 DICER1Q9UPY3 1922 aaKnown RBP14.51□□□□□ -0.09
RORA-207ENST00000558234 FOXO4P98177 505 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 PRR5LQ6MZQ0 368 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 ZPR1O75312 459 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 MYD88Q99836 296 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 SBF1O95248 1867 aa14.51□□□□□ -0.09
RORA-207ENST00000558234 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
RORA-207ENST00000558234 CSF1RP07333 972 aa14.5□□□□□ -0.09
RORA-207ENST00000558234 C3orf67Q6ZVT6 689 aa14.5□□□□□ -0.09
RORA-207ENST00000558234 KCNA3P22001 575 aa14.49□□□□□ -0.09
RORA-207ENST00000558234 MTX1Q13505 466 aa14.49□□□□□ -0.09
RORA-207ENST00000558234 ANKRD44Q8N8A2 993 aa14.49□□□□□ -0.09
RORA-207ENST00000558234 RIC3Q7Z5B4 369 aa14.49□□□□□ -0.09
RORA-207ENST00000558234 CWC25Q9NXE8 425 aaPredicted RBP14.48□□□□□ -0.09
RORA-207ENST00000558234 MMP10P09238 476 aa14.48□□□□□ -0.09
RORA-207ENST00000558234 SMC5Q8IY18 1101 aa14.48□□□□□ -0.09
RORA-207ENST00000558234 NIP7Q9Y221 180 aaKnown RBP eCLIP14.48□□□□□ -0.09
RORA-207ENST00000558234 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
RORA-207ENST00000558234 SYNE4Q8N205 404 aa14.48□□□□□ -0.09
RORA-207ENST00000558234 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
RORA-207ENST00000558234 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
RORA-207ENST00000558234 GRM8O00222 908 aa14.47□□□□□ -0.09
RORA-207ENST00000558234 SERPINB2P05120 415 aa14.47□□□□□ -0.09
RORA-207ENST00000558234 EPHA10Q5JZY3 1008 aa14.47□□□□□ -0.09
RORA-207ENST00000558234 SF3B3Q15393 1217 aaKnown RBP14.47□□□□□ -0.09
RORA-207ENST00000558234 ERFEQ4G0M1 354 aa14.47□□□□□ -0.09
RORA-207ENST00000558234 HOXA10P31260 410 aaPredicted RBP14.46□□□□□ -0.09
RORA-207ENST00000558234 RFX5P48382 616 aaPredicted RBP14.46□□□□□ -0.09
RORA-207ENST00000558234 MEIS3Q99687 375 aa14.46□□□□□ -0.09
RORA-207ENST00000558234 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
RORA-207ENST00000558234 MSL1Q68DK7 614 aa14.46□□□□□ -0.1
RORA-207ENST00000558234 SETDB2Q96T68 719 aa14.46□□□□□ -0.1
RORA-207ENST00000558234 NYXQ9GZU5 481 aa14.46□□□□□ -0.1
RORA-207ENST00000558234 ZBTB7AO95365 584 aa14.45□□□□□ -0.1
RORA-207ENST00000558234 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
RORA-207ENST00000558234 SH3TC1Q8TE82 1336 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 TIAM2Q8IVF5 1701 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 GPTP24298 496 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 POLA2Q14181 598 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 PPP1R42Q7Z4L9 355 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 GOLGB1Q14789 3259 aaKnown RBP14.44□□□□□ -0.1
RORA-207ENST00000558234 SKAP1Q86WV1 359 aa14.44□□□□□ -0.1
RORA-207ENST00000558234 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
RORA-207ENST00000558234 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms