RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PLIN1O60240 522 aa26.94■■□□□ 1.9
CASC4-204ENST00000557945 CNBD1Q8NA66 436 aa26.94■■□□□ 1.9
CASC4-204ENST00000557945 TRMT112Q9UI30 125 aaKnown RBP26.94■■□□□ 1.9
CASC4-204ENST00000557945 FTSJ3Q8IY81 847 aaKnown RBP26.93■■□□□ 1.9
CASC4-204ENST00000557945 NUTM1Q86Y26 1132 aa26.92■■□□□ 1.9
CASC4-204ENST00000557945 CCDC24Q8N4L8 307 aa26.92■■□□□ 1.9
CASC4-204ENST00000557945 PPP1R1BQ9UD71 204 aaPredicted RBP26.92■■□□□ 1.9
CASC4-204ENST00000557945 NTSR2O95665 410 aa26.91■■□□□ 1.9
CASC4-204ENST00000557945 CCT4P50991 539 aaKnown RBP26.91■■□□□ 1.9
CASC4-204ENST00000557945 PRR5LQ6MZQ0 368 aa26.91■■□□□ 1.9
CASC4-204ENST00000557945 ABCC4O15439 1325 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 ALDH1L1O75891 902 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 ST5P78524 1137 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 GCKRQ14397 625 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 RTL5Q5HYW3 569 aaPredicted RBP26.9■■□□□ 1.9
CASC4-204ENST00000557945 DZIP1LQ8IYY4 767 aaKnown RBP26.9■■□□□ 1.9
CASC4-204ENST00000557945 KLHL34Q8N239 644 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 PXDNLA1KZ92 1463 aa26.9■■□□□ 1.9
CASC4-204ENST00000557945 IBTKQ9P2D0 1353 aaPredicted RBP26.9■■□□□ 1.9
CASC4-204ENST00000557945 ERFEQ4G0M1 354 aa26.89■■□□□ 1.9
CASC4-204ENST00000557945 FAM89AQ96GI7 184 aa26.89■■□□□ 1.9
CASC4-204ENST00000557945 SH3TC1Q8TE82 1336 aa26.88■■□□□ 1.89
CASC4-204ENST00000557945 ZBTB38Q8NAP3 1195 aaPredicted RBP26.88■■□□□ 1.89
CASC4-204ENST00000557945 JARID2Q92833 1246 aaPredicted RBP26.88■■□□□ 1.89
CASC4-204ENST00000557945 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
CASC4-204ENST00000557945 MS4A1P11836 297 aa26.87■■□□□ 1.89
CASC4-204ENST00000557945 PCCAP05165 728 aaPredicted RBP26.86■■□□□ 1.89
CASC4-204ENST00000557945 RRP1P56182 461 aaKnown RBP26.86■■□□□ 1.89
CASC4-204ENST00000557945 INTS3Q68E01 1043 aaKnown RBP26.86■■□□□ 1.89
CASC4-204ENST00000557945 SYNE4Q8N205 404 aa26.86■■□□□ 1.89
CASC4-204ENST00000557945 TMEM57Q8N5G2 664 aa26.86■■□□□ 1.89
CASC4-204ENST00000557945 C9orf78Q9NZ63 289 aaPredicted RBP26.86■■□□□ 1.89
CASC4-204ENST00000557945 RNF123Q5XPI4 1314 aa26.86■■□□□ 1.89
CASC4-204ENST00000557945 CENPBP07199 599 aaPredicted RBP26.85■■□□□ 1.89
CASC4-204ENST00000557945 RLBP1P12271 317 aa26.85■■□□□ 1.89
CASC4-204ENST00000557945 PANK1Q8TE04 598 aa26.85■■□□□ 1.89
CASC4-204ENST00000557945 NRXN2Q9P2S2 1712 aa26.85■■□□□ 1.89
CASC4-204ENST00000557945 UBE3BQ7Z3V4 1068 aa26.84■■□□□ 1.89
CASC4-204ENST00000557945 ABCC12Q96J65 1359 aa26.84■■□□□ 1.89
CASC4-204ENST00000557945 HCLS1P14317 486 aaPredicted RBP26.84■■□□□ 1.89
CASC4-204ENST00000557945 SUPT16HQ9Y5B9 1047 aaKnown RBP26.84■■□□□ 1.89
CASC4-204ENST00000557945 H7C1W4 665 aa26.83■■□□□ 1.88
CASC4-204ENST00000557945 GRM8O00222 908 aa26.83■■□□□ 1.88
CASC4-204ENST00000557945 ITPRIPQ8IWB1 547 aa26.83■■□□□ 1.88
CASC4-204ENST00000557945 BRIP1Q9BX63 1249 aa26.83■■□□□ 1.88
CASC4-204ENST00000557945 C10orf71Q711Q0 1435 aa26.82■■□□□ 1.88
CASC4-204ENST00000557945 IRS4O14654 1257 aaPredicted RBP26.82■■□□□ 1.88
CASC4-204ENST00000557945 LRP5O75197 1615 aa26.81■■□□□ 1.88
CASC4-204ENST00000557945 SLC10A5Q5PT55 438 aa26.81■■□□□ 1.88
CASC4-204ENST00000557945 C20orf194Q5TEA3 1177 aa26.81■■□□□ 1.88
CASC4-204ENST00000557945 CD2APQ9Y5K6 639 aa26.81■■□□□ 1.88
CASC4-204ENST00000557945 PDE3AQ14432 1141 aa26.8■■□□□ 1.88
CASC4-204ENST00000557945 FHDC1Q9C0D6 1143 aaPredicted RBP26.8■■□□□ 1.88
CASC4-204ENST00000557945 HSP90B1P14625 803 aaKnown RBP26.79■■□□□ 1.88
CASC4-204ENST00000557945 PDE6BP35913 854 aa26.79■■□□□ 1.88
CASC4-204ENST00000557945 USP44Q9H0E7 712 aa26.79■■□□□ 1.88
CASC4-204ENST00000557945 CDHR2Q9BYE9 1310 aa26.79■■□□□ 1.88
CASC4-204ENST00000557945 N4BP2Q86UW6 1770 aaPredicted RBP26.78■■□□□ 1.88
CASC4-204ENST00000557945 NBPF7P0C2Y1 421 aaPredicted RBP26.78■■□□□ 1.88
CASC4-204ENST00000557945 CASP7P55210 303 aa26.78■■□□□ 1.88
CASC4-204ENST00000557945 NLRP3Q96P20 1036 aa26.78■■□□□ 1.88
CASC4-204ENST00000557945 COG6Q9Y2V7 657 aa26.78■■□□□ 1.88
CASC4-204ENST00000557945 C2CD5Q86YS7 1000 aa26.76■■□□□ 1.87
CASC4-204ENST00000557945 MEIS3Q99687 375 aa26.76■■□□□ 1.87
CASC4-204ENST00000557945 PDE8AO60658 829 aa26.75■■□□□ 1.87
CASC4-204ENST00000557945 UBTFL1P0CB47 393 aaPredicted RBP26.75■■□□□ 1.87
CASC4-204ENST00000557945 MVPQ14764 893 aaKnown RBP26.75■■□□□ 1.87
CASC4-204ENST00000557945 C3orf67Q6ZVT6 689 aa26.75■■□□□ 1.87
CASC4-204ENST00000557945 UTYO14607 1347 aa26.75■■□□□ 1.87
CASC4-204ENST00000557945 H0YIN7 160 aa26.74■■□□□ 1.87
CASC4-204ENST00000557945 CHRNA5P30532 468 aa26.74■■□□□ 1.87
CASC4-204ENST00000557945 TGFB2P61812 414 aa26.74■■□□□ 1.87
CASC4-204ENST00000557945 RIC1Q4ADV7 1423 aa26.74■■□□□ 1.87
CASC4-204ENST00000557945 ANKRD31Q8N7Z5 1873 aa26.74■■□□□ 1.87
CASC4-204ENST00000557945 A0A0G2JLW4 131 aa26.73■■□□□ 1.87
CASC4-204ENST00000557945 GNAI3P08754 354 aa26.73■■□□□ 1.87
CASC4-204ENST00000557945 SUCLG2Q96I99 432 aa26.73■■□□□ 1.87
CASC4-204ENST00000557945 DPEP1P16444 411 aa26.72■■□□□ 1.87
CASC4-204ENST00000557945 NLGN2Q8NFZ4 835 aa26.72■■□□□ 1.87
CASC4-204ENST00000557945 SYT17Q9BSW7 474 aa26.72■■□□□ 1.87
CASC4-204ENST00000557945 PDZRN3Q9UPQ7 1066 aa26.72■■□□□ 1.87
CASC4-204ENST00000557945 TNRC6CQ9HCJ0 1690 aaKnown RBP26.72■■□□□ 1.87
CASC4-204ENST00000557945 KIF13BQ9NQT8 1826 aa26.72■■□□□ 1.87
CASC4-204ENST00000557945 KLRG2A4D1S0 409 aaPredicted RBP26.71■■□□□ 1.87
CASC4-204ENST00000557945 RPGRQ92834 1020 aaKnown RBP26.71■■□□□ 1.87
CASC4-204ENST00000557945 PLA2G12BQ9BX93 195 aa26.71■■□□□ 1.87
CASC4-204ENST00000557945 DDX60Q8IY21 1712 aaKnown RBP26.71■■□□□ 1.87
CASC4-204ENST00000557945 CTSWP56202 376 aa26.71■■□□□ 1.87
CASC4-204ENST00000557945 ZNF622Q969S3 477 aaKnown RBP eCLIP26.71■■□□□ 1.871e-7■□□□□ 10.9
CASC4-204ENST00000557945 CCDC85AQ96PX6 553 aaPredicted RBP26.71■■□□□ 1.87
CASC4-204ENST00000557945 DDX19BQ9UMR2 479 aa26.71■■□□□ 1.87
CASC4-204ENST00000557945 HDAC5Q9UQL6 1122 aa26.71■■□□□ 1.87
CASC4-204ENST00000557945 ZBTB7BO15156 539 aaPredicted RBP26.7■■□□□ 1.86
CASC4-204ENST00000557945 SRGNP10124 158 aa26.7■■□□□ 1.86
CASC4-204ENST00000557945 CRY2Q49AN0 593 aa26.7■■□□□ 1.86
CASC4-204ENST00000557945 FOXO4P98177 505 aa26.69■■□□□ 1.86
CASC4-204ENST00000557945 SF3B3Q15393 1217 aaKnown RBP26.69■■□□□ 1.86
CASC4-204ENST00000557945 CCDC152Q4G0S7 254 aa26.69■■□□□ 1.86
CASC4-204ENST00000557945 EPHA10Q5JZY3 1008 aa26.69■■□□□ 1.86
CASC4-204ENST00000557945 MASTLQ96GX5 879 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms