RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
APEX1-217ENST00000557181 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
APEX1-217ENST00000557181 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
APEX1-217ENST00000557181 KIF13BQ9NQT8 1826 aa16.15■□□□□ 0.18
APEX1-217ENST00000557181 F6X3S4 739 aa16.15■□□□□ 0.18
APEX1-217ENST00000557181 NTSR2O95665 410 aa16.15■□□□□ 0.18
APEX1-217ENST00000557181 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
APEX1-217ENST00000557181 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
APEX1-217ENST00000557181 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
APEX1-217ENST00000557181 API5Q9BZZ5 524 aaKnown RBP16.15■□□□□ 0.18
APEX1-217ENST00000557181 H0YIN7 160 aa16.14■□□□□ 0.17
APEX1-217ENST00000557181 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
APEX1-217ENST00000557181 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
APEX1-217ENST00000557181 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
APEX1-217ENST00000557181 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
APEX1-217ENST00000557181 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
APEX1-217ENST00000557181 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 A0A0G2JLW4 131 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 NEURL1BA8MQ27 555 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 BCAR3O75815 825 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 DPEP1P16444 411 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
APEX1-217ENST00000557181 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
APEX1-217ENST00000557181 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
APEX1-217ENST00000557181 ZNF622Q969S3 477 aaKnown RBP eCLIP16.12■□□□□ 0.17
APEX1-217ENST00000557181 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
APEX1-217ENST00000557181 N4BP2Q86UW6 1770 aaPredicted RBP16.12■□□□□ 0.17
APEX1-217ENST00000557181 CHRNA5P30532 468 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 GPR162Q16538 588 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
APEX1-217ENST00000557181 RPGRQ92834 1020 aaKnown RBP16.11■□□□□ 0.17
APEX1-217ENST00000557181 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 WWC3Q9ULE0 1092 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 ANKRD31Q8N7Z5 1873 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 ABCC12Q96J65 1359 aa16.11■□□□□ 0.17
APEX1-217ENST00000557181 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
APEX1-217ENST00000557181 IGKV5-2P06315 115 aa16.1■□□□□ 0.17
APEX1-217ENST00000557181 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
APEX1-217ENST00000557181 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
APEX1-217ENST00000557181 ALDH1L1O75891 902 aa16.09■□□□□ 0.17
APEX1-217ENST00000557181 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
APEX1-217ENST00000557181 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
APEX1-217ENST00000557181 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
APEX1-217ENST00000557181 GCKRQ14397 625 aa16.09■□□□□ 0.17
APEX1-217ENST00000557181 DALRD3Q5D0E6 543 aaKnown RBP16.09■□□□□ 0.17
APEX1-217ENST00000557181 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
APEX1-217ENST00000557181 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
APEX1-217ENST00000557181 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
APEX1-217ENST00000557181 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
APEX1-217ENST00000557181 NPR1P16066 1061 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 ATF7IPQ6VMQ6 1270 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 CNKSR1Q969H4 720 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 MASTLQ96GX5 879 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.16
APEX1-217ENST00000557181 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
APEX1-217ENST00000557181 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
APEX1-217ENST00000557181 STYK1Q6J9G0 422 aa16.07■□□□□ 0.16
APEX1-217ENST00000557181 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
APEX1-217ENST00000557181 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
APEX1-217ENST00000557181 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
APEX1-217ENST00000557181 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
APEX1-217ENST00000557181 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
APEX1-217ENST00000557181 LAMB2P55268 1798 aa16.06■□□□□ 0.16
APEX1-217ENST00000557181 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
APEX1-217ENST00000557181 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
APEX1-217ENST00000557181 SRGNP10124 158 aa16.06■□□□□ 0.16
APEX1-217ENST00000557181 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
APEX1-217ENST00000557181 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
APEX1-217ENST00000557181 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
APEX1-217ENST00000557181 GRM8O00222 908 aa16.05■□□□□ 0.16
APEX1-217ENST00000557181 PDE8AO60658 829 aa16.05■□□□□ 0.16
APEX1-217ENST00000557181 MS4A1P11836 297 aa16.05■□□□□ 0.16
APEX1-217ENST00000557181 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
APEX1-217ENST00000557181 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
APEX1-217ENST00000557181 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
APEX1-217ENST00000557181 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 H7C1W4 665 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 TRIM27P14373 513 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 CCDC152Q4G0S7 254 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 HDAC5Q9UQL6 1122 aa16.04■□□□□ 0.16
APEX1-217ENST00000557181 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
APEX1-217ENST00000557181 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
APEX1-217ENST00000557181 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
APEX1-217ENST00000557181 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
APEX1-217ENST00000557181 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
APEX1-217ENST00000557181 MYH3P11055 1940 aa16.02■□□□□ 0.16
APEX1-217ENST00000557181 ABCC4O15439 1325 aa16.02■□□□□ 0.16
APEX1-217ENST00000557181 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
APEX1-217ENST00000557181 KCNA3P22001 575 aa16.02■□□□□ 0.16
APEX1-217ENST00000557181 CTSWP56202 376 aa16.02■□□□□ 0.16
APEX1-217ENST00000557181 PRPF40BQ6NWY9 871 aaKnown RBP16.02■□□□□ 0.16
APEX1-217ENST00000557181 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
APEX1-217ENST00000557181 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
APEX1-217ENST00000557181 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms