RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
SRP54-213ENST00000556994 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
SRP54-213ENST00000556994 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
SRP54-213ENST00000556994 TLR7Q9NYK1 1049 aaKnown RBP13.57□□□□□ -0.24
SRP54-213ENST00000556994 CEMIPQ8WUJ3 1361 aa13.57□□□□□ -0.24
SRP54-213ENST00000556994 SLC27A2O14975 620 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 PTGS1P23219 599 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
SRP54-213ENST00000556994 KRT85P78386 507 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
SRP54-213ENST00000556994 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 SIL1Q9H173 461 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 CBX1P83916 185 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 KCNB2Q92953 911 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
SRP54-213ENST00000556994 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
SRP54-213ENST00000556994 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
SRP54-213ENST00000556994 SASH1O94885 1247 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 TYRO3Q06418 890 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
SRP54-213ENST00000556994 MAP3K11Q16584 847 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 MTX1Q13505 466 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
SRP54-213ENST00000556994 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
SRP54-213ENST00000556994 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
SRP54-213ENST00000556994 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
SRP54-213ENST00000556994 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
SRP54-213ENST00000556994 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
SRP54-213ENST00000556994 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
SRP54-213ENST00000556994 NRBP1Q9UHY1 535 aa13.54□□□□□ -0.24
SRP54-213ENST00000556994 CRYBG1Q9Y4K1 1723 aa13.54□□□□□ -0.24
SRP54-213ENST00000556994 GOLGA6L4A6NEF3 574 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 LRMPQ12912 555 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
SRP54-213ENST00000556994 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
SRP54-213ENST00000556994 FSD1Q9BTV5 496 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
SRP54-213ENST00000556994 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 HOXB7P09629 217 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■□□□ 11.8
SRP54-213ENST00000556994 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
SRP54-213ENST00000556994 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 TBX22Q9Y458 520 aa13.53□□□□□ -0.24
SRP54-213ENST00000556994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.24
SRP54-213ENST00000556994 KCNA6P17658 529 aa13.52□□□□□ -0.24
SRP54-213ENST00000556994 PSMA5P28066 241 aa13.52□□□□□ -0.24
SRP54-213ENST00000556994 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.24
SRP54-213ENST00000556994 KSR2Q6VAB6 950 aa13.52□□□□□ -0.24
SRP54-213ENST00000556994 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.24
SRP54-213ENST00000556994 IP6K1Q92551 441 aa13.52□□□□□ -0.24
SRP54-213ENST00000556994 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
SRP54-213ENST00000556994 CHAF1AQ13111 956 aaPredicted RBP13.52□□□□□ -0.25
SRP54-213ENST00000556994 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
SRP54-213ENST00000556994 MARF1Q9Y4F3 1742 aaKnown RBP13.51□□□□□ -0.25
SRP54-213ENST00000556994 JAK2O60674 1132 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 NR1I2O75469 434 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 CHGBP05060 677 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 GRM8O00222 908 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
SRP54-213ENST00000556994 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 PDCP20941 246 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
SRP54-213ENST00000556994 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
SRP54-213ENST00000556994 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
SRP54-213ENST00000556994 TPM3P06753 285 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
SRP54-213ENST00000556994 ELP1O95163 1332 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
SRP54-213ENST00000556994 CEBPZQ03701 1054 aaKnown RBP13.5□□□□□ -0.25
SRP54-213ENST00000556994 RNF20Q5VTR2 975 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 C16orf45Q96MC5 204 aaPredicted RBP13.5□□□□□ -0.25
SRP54-213ENST00000556994 SCAND2PQ9GZW5 306 aaPredicted RBP13.5□□□□□ -0.25
SRP54-213ENST00000556994 DNAJC25Q9H1X3 360 aa13.5□□□□□ -0.25
SRP54-213ENST00000556994 NPHP4O75161 1426 aaPredicted RBP13.49□□□□□ -0.25
SRP54-213ENST00000556994 HIP1O00291 1037 aa13.48□□□□□ -0.25
SRP54-213ENST00000556994 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
SRP54-213ENST00000556994 FOSBP53539 338 aa13.48□□□□□ -0.25
SRP54-213ENST00000556994 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms