RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
SRP54-AS1-204ENST00000556705 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
SRP54-AS1-204ENST00000556705 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SRP54-AS1-204ENST00000556705 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
SRP54-AS1-204ENST00000556705 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
SRP54-AS1-204ENST00000556705 LMNB1P20700 586 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 HSP90AB3PQ58FF7 597 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 PLBD2Q8NHP8 589 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
SRP54-AS1-204ENST00000556705 LAMB2P55268 1798 aa17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 CRY2Q49AN0 593 aa17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 C3orf67Q6ZVT6 689 aa17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
SRP54-AS1-204ENST00000556705 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
SRP54-AS1-204ENST00000556705 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
SRP54-AS1-204ENST00000556705 IL16Q14005 1332 aa17.12■□□□□ 0.33
SRP54-AS1-204ENST00000556705 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
SRP54-AS1-204ENST00000556705 KIF3CO14782 793 aa17.11■□□□□ 0.33
SRP54-AS1-204ENST00000556705 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
SRP54-AS1-204ENST00000556705 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
SRP54-AS1-204ENST00000556705 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
SRP54-AS1-204ENST00000556705 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 TAF1P21675 1872 aa17.1■□□□□ 0.33
SRP54-AS1-204ENST00000556705 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 TAOK3Q9H2K8 898 aa17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 LTBP3Q9NS15 1303 aa17.09■□□□□ 0.33
SRP54-AS1-204ENST00000556705 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
SRP54-AS1-204ENST00000556705 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
SRP54-AS1-204ENST00000556705 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
SRP54-AS1-204ENST00000556705 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
SRP54-AS1-204ENST00000556705 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
SRP54-AS1-204ENST00000556705 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
SRP54-AS1-204ENST00000556705 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
SRP54-AS1-204ENST00000556705 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
SRP54-AS1-204ENST00000556705 SLC51AQ86UW1 340 aa17.06■□□□□ 0.32
SRP54-AS1-204ENST00000556705 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 TRIM28Q13263 835 aaKnown RBP17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RTKN2Q8IZC4 609 aa17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 FAM89AQ96GI7 184 aa17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
SRP54-AS1-204ENST00000556705 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 G2E3Q7L622 706 aa17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 MYD88Q99836 296 aa17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
SRP54-AS1-204ENST00000556705 VAMP4O75379 141 aa17.03■□□□□ 0.32
SRP54-AS1-204ENST00000556705 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
SRP54-AS1-204ENST00000556705 ABCC4O15439 1325 aa17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.32
SRP54-AS1-204ENST00000556705 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
SRP54-AS1-204ENST00000556705 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
SRP54-AS1-204ENST00000556705 TOMM70O94826 608 aa17.01■□□□□ 0.31
SRP54-AS1-204ENST00000556705 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
SRP54-AS1-204ENST00000556705 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
SRP54-AS1-204ENST00000556705 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
SRP54-AS1-204ENST00000556705 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
SRP54-AS1-204ENST00000556705 WDR90Q96KV7 1748 aa17■□□□□ 0.31
SRP54-AS1-204ENST00000556705 PSMD1Q99460 953 aa17■□□□□ 0.31
SRP54-AS1-204ENST00000556705 POTECB2RU33 542 aa16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 BBOX1O75936 387 aa16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 ZBTB38Q8NAP3 1195 aaPredicted RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
SRP54-AS1-204ENST00000556705 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms