RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HLFQ16534 295 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
ACTN1-219ENST00000556432 MCM10Q7L590 875 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 NYXQ9GZU5 481 aa18.63■□□□□ 0.57
ACTN1-219ENST00000556432 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
ACTN1-219ENST00000556432 RGL2O15211 777 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 AOC2O75106 756 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 USP50Q70EL3 339 aaPredicted RBP18.62■□□□□ 0.57
ACTN1-219ENST00000556432 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 TLL2Q9Y6L7 1015 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 COL4A5P29400 1685 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 LTBP1Q14766 1721 aa18.62■□□□□ 0.57
ACTN1-219ENST00000556432 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
ACTN1-219ENST00000556432 CST9Q5W186 159 aa18.61■□□□□ 0.57
ACTN1-219ENST00000556432 PER1O15534 1290 aaPredicted RBP18.6■□□□□ 0.57
ACTN1-219ENST00000556432 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
ACTN1-219ENST00000556432 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
ACTN1-219ENST00000556432 SNED1Q8TER0 1413 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 TRPM7Q96QT4 1865 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-219ENST00000556432 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 CELF2O95319 508 aaKnown RBP18.59■□□□□ 0.57
ACTN1-219ENST00000556432 MAP2K2P36507 400 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 RGS19P49795 217 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
ACTN1-219ENST00000556432 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-219ENST00000556432 CA12O43570 354 aa18.58■□□□□ 0.56
ACTN1-219ENST00000556432 GPTP24298 496 aa18.58■□□□□ 0.56
ACTN1-219ENST00000556432 DCTN1Q14203 1278 aa18.58■□□□□ 0.56
ACTN1-219ENST00000556432 KIF6Q6ZMV9 814 aa18.58■□□□□ 0.56
ACTN1-219ENST00000556432 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.56
ACTN1-219ENST00000556432 MCOLN1Q9GZU1 580 aa18.58■□□□□ 0.56
ACTN1-219ENST00000556432 ZNF408Q9H9D4 720 aa18.57■□□□□ 0.56
ACTN1-219ENST00000556432 ADARB2Q9NS39 739 aaKnown RBP18.57■□□□□ 0.56
ACTN1-219ENST00000556432 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
ACTN1-219ENST00000556432 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
ACTN1-219ENST00000556432 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
ACTN1-219ENST00000556432 AOC3Q16853 763 aa18.56■□□□□ 0.56
ACTN1-219ENST00000556432 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
ACTN1-219ENST00000556432 GPRC5DQ9NZD1 345 aa18.56■□□□□ 0.56
ACTN1-219ENST00000556432 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
ACTN1-219ENST00000556432 DGKZQ13574 1117 aa18.55■□□□□ 0.56
ACTN1-219ENST00000556432 SAPCD2Q86UD0 394 aa18.55■□□□□ 0.56
ACTN1-219ENST00000556432 GLIS2Q9BZE0 524 aaPredicted RBP18.55■□□□□ 0.56
ACTN1-219ENST00000556432 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
ACTN1-219ENST00000556432 PCDH10Q9P2E7 1040 aa18.55■□□□□ 0.56
ACTN1-219ENST00000556432 RRP7AQ9Y3A4 280 aaKnown RBP18.55■□□□□ 0.56
ACTN1-219ENST00000556432 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
ACTN1-219ENST00000556432 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
ACTN1-219ENST00000556432 CRAMP1Q96RY5 1269 aa18.54■□□□□ 0.56
ACTN1-219ENST00000556432 ZBTB3Q9H5J0 574 aa18.54■□□□□ 0.56
ACTN1-219ENST00000556432 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
ACTN1-219ENST00000556432 GMPSP49915 693 aaPredicted RBP18.53■□□□□ 0.56
ACTN1-219ENST00000556432 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
ACTN1-219ENST00000556432 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
ACTN1-219ENST00000556432 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
ACTN1-219ENST00000556432 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
ACTN1-219ENST00000556432 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
ACTN1-219ENST00000556432 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
ACTN1-219ENST00000556432 CASP8AP2Q9UKL3 1982 aa18.52■□□□□ 0.56
ACTN1-219ENST00000556432 MYL6BP14649 208 aa18.52■□□□□ 0.56
ACTN1-219ENST00000556432 SUSD4Q5VX71 490 aa18.52■□□□□ 0.56
ACTN1-219ENST00000556432 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
ACTN1-219ENST00000556432 LAMB4A4D0S4 1761 aa18.52■□□□□ 0.55
ACTN1-219ENST00000556432 CXCL9Q07325 125 aa18.51■□□□□ 0.55
ACTN1-219ENST00000556432 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
ACTN1-219ENST00000556432 ZNRF3Q9ULT6 936 aa18.51■□□□□ 0.55
ACTN1-219ENST00000556432 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
ACTN1-219ENST00000556432 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
ACTN1-219ENST00000556432 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
ACTN1-219ENST00000556432 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
ACTN1-219ENST00000556432 HHIPL1Q96JK4 782 aa18.5■□□□□ 0.55
ACTN1-219ENST00000556432 NUP98P52948 1817 aa18.5■□□□□ 0.55
ACTN1-219ENST00000556432 NTSR2O95665 410 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 PDE4DIPQ5VU43 2346 aa18.49■□□□□ 0.55
ACTN1-219ENST00000556432 RAD17O75943 681 aa18.48■□□□□ 0.55
ACTN1-219ENST00000556432 NOGQ13253 232 aa18.48■□□□□ 0.55
ACTN1-219ENST00000556432 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
ACTN1-219ENST00000556432 HUNKP57058 714 aa18.47■□□□□ 0.55
ACTN1-219ENST00000556432 TNIP1Q15025 636 aa18.47■□□□□ 0.55
ACTN1-219ENST00000556432 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
ACTN1-219ENST00000556432 TRPM4Q8TD43 1214 aa18.47■□□□□ 0.55
ACTN1-219ENST00000556432 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
ACTN1-219ENST00000556432 CDHR2Q9BYE9 1310 aa18.47■□□□□ 0.55
ACTN1-219ENST00000556432 NEFMP07197 916 aa18.46■□□□□ 0.55
ACTN1-219ENST00000556432 ZNF34Q8IZ26 560 aa18.46■□□□□ 0.55
ACTN1-219ENST00000556432 ZC3H15Q8WU90 426 aaKnown RBP18.46■□□□□ 0.55
ACTN1-219ENST00000556432 ABCC4O15439 1325 aa18.46■□□□□ 0.55
ACTN1-219ENST00000556432 PARP10Q53GL7 1025 aa18.45■□□□□ 0.54
ACTN1-219ENST00000556432 USP48Q86UV5 1035 aa18.45■□□□□ 0.54
ACTN1-219ENST00000556432 MPNDQ8N594 471 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms