RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 PROM2Q8N271 834 aa21.31■■□□□ 1
LRP1-210ENST00000556247 KAZALD1Q96I82 304 aa21.31■■□□□ 1
LRP1-210ENST00000556247 NARFQ9UHQ1 456 aa21.31■■□□□ 1
LRP1-210ENST00000556247 PARP10Q53GL7 1025 aa21.3■■□□□ 1
LRP1-210ENST00000556247 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
LRP1-210ENST00000556247 SKAP1Q86WV1 359 aa21.3■■□□□ 1
LRP1-210ENST00000556247 ZBTB38Q8NAP3 1195 aaPredicted RBP21.3■■□□□ 1
LRP1-210ENST00000556247 ANKRD36CQ5JPF3 1778 aa21.3■■□□□ 1
LRP1-210ENST00000556247 PHF14O94880 888 aa21.29■■□□□ 1
LRP1-210ENST00000556247 ADRA2BP18089 450 aa21.29■■□□□ 1
LRP1-210ENST00000556247 RFC4P35249 363 aa21.29■■□□□ 1
LRP1-210ENST00000556247 RGS3P49796 1198 aa21.29■■□□□ 1
LRP1-210ENST00000556247 SMIM5Q71RC9 77 aa21.29■■□□□ 1
LRP1-210ENST00000556247 CHD1LQ86WJ1 897 aa21.29■■□□□ 1
LRP1-210ENST00000556247 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
LRP1-210ENST00000556247 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
LRP1-210ENST00000556247 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
LRP1-210ENST00000556247 USPL1Q5W0Q7 1092 aa21.28■■□□□ 1
LRP1-210ENST00000556247 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
LRP1-210ENST00000556247 SF3B2Q13435 895 aaKnown RBP21.27■■□□□ 1
LRP1-210ENST00000556247 FAM89AQ96GI7 184 aa21.27■■□□□ 1
LRP1-210ENST00000556247 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
LRP1-210ENST00000556247 TNS1Q9HBL0 1735 aaKnown RBP21.26■□□□□ 0.99
LRP1-210ENST00000556247 APBB1O00213 710 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 SURF6O75683 361 aaKnown RBP21.26■□□□□ 0.99
LRP1-210ENST00000556247 FOXO4P98177 505 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
LRP1-210ENST00000556247 HSP90AB4PQ58FF6 505 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
LRP1-210ENST00000556247 LNPKQ9C0E8 428 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
LRP1-210ENST00000556247 BCORQ6W2J9 1755 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.25■□□□□ 0.99
LRP1-210ENST00000556247 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 SSFA2P28290 1259 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 LMBR1LQ6UX01 489 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 AMIGO3Q86WK7 504 aa21.25■□□□□ 0.99
LRP1-210ENST00000556247 FAM177BA6PVY3 158 aa21.24■□□□□ 0.99
LRP1-210ENST00000556247 PLA2G12BQ9BX93 195 aa21.24■□□□□ 0.99
LRP1-210ENST00000556247 BCL2L12Q9HB09 334 aa21.24■□□□□ 0.99
LRP1-210ENST00000556247 CHMP3Q9Y3E7 222 aa21.24■□□□□ 0.99
LRP1-210ENST00000556247 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
LRP1-210ENST00000556247 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
LRP1-210ENST00000556247 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
LRP1-210ENST00000556247 HSP90B1P14625 803 aaKnown RBP21.22■□□□□ 0.99
LRP1-210ENST00000556247 OS9Q13438 667 aaPredicted RBP21.22■□□□□ 0.99
LRP1-210ENST00000556247 BICDL1Q6ZP65 573 aa21.22■□□□□ 0.99
LRP1-210ENST00000556247 SETDB2Q96T68 719 aa21.22■□□□□ 0.99
LRP1-210ENST00000556247 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
LRP1-210ENST00000556247 TFCP2L1Q9NZI6 479 aa21.22■□□□□ 0.99
LRP1-210ENST00000556247 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
LRP1-210ENST00000556247 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
LRP1-210ENST00000556247 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 PDE4AP27815 886 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 BAG6P46379 1132 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 EN1Q05925 392 aaPredicted RBP21.21■□□□□ 0.99
LRP1-210ENST00000556247 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.99
LRP1-210ENST00000556247 TBC1D9BQ66K14 1250 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
LRP1-210ENST00000556247 SMARCA5O60264 1052 aaPredicted RBP21.2■□□□□ 0.98
LRP1-210ENST00000556247 PDE8AO60658 829 aa21.2■□□□□ 0.98
LRP1-210ENST00000556247 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
LRP1-210ENST00000556247 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
LRP1-210ENST00000556247 PA2G4Q9UQ80 394 aaKnown RBP21.2■□□□□ 0.98
LRP1-210ENST00000556247 NTSR2O95665 410 aa21.19■□□□□ 0.98
LRP1-210ENST00000556247 EZH2Q15910 746 aaKnown RBP21.19■□□□□ 0.98
LRP1-210ENST00000556247 ERC1Q8IUD2 1116 aa21.19■□□□□ 0.98
LRP1-210ENST00000556247 FLAD1Q8NFF5 587 aa21.19■□□□□ 0.98
LRP1-210ENST00000556247 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
LRP1-210ENST00000556247 NYXQ9GZU5 481 aa21.19■□□□□ 0.98
LRP1-210ENST00000556247 CSF1RP07333 972 aa21.18■□□□□ 0.98
LRP1-210ENST00000556247 RFX5P48382 616 aaPredicted RBP21.18■□□□□ 0.98
LRP1-210ENST00000556247 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
LRP1-210ENST00000556247 RHPN1Q8TCX5 695 aa21.18■□□□□ 0.98
LRP1-210ENST00000556247 COPRSQ9NQ92 184 aa21.18■□□□□ 0.98
LRP1-210ENST00000556247 C4AP0C0L4 1744 aa21.18■□□□□ 0.98
LRP1-210ENST00000556247 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
LRP1-210ENST00000556247 CTSWP56202 376 aa21.17■□□□□ 0.98
LRP1-210ENST00000556247 CCDC57Q2TAC2 916 aa21.17■□□□□ 0.98
LRP1-210ENST00000556247 MSH5O43196 834 aa21.16■□□□□ 0.98
LRP1-210ENST00000556247 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
LRP1-210ENST00000556247 PTPN12Q05209 780 aaKnown RBP21.16■□□□□ 0.98
LRP1-210ENST00000556247 SIL1Q9H173 461 aa21.16■□□□□ 0.98
LRP1-210ENST00000556247 GYS1P13807 737 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 TPTE2Q6XPS3 522 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 NBPF5PQ86XG9 351 aaPredicted RBP21.15■□□□□ 0.98
LRP1-210ENST00000556247 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 C16orf71Q8IYS4 520 aaPredicted RBP21.15■□□□□ 0.98
LRP1-210ENST00000556247 TTLL11Q8NHH1 800 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 KLHDC4Q8TBB5 520 aa21.15■□□□□ 0.98
LRP1-210ENST00000556247 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
LRP1-210ENST00000556247 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
LRP1-210ENST00000556247 CCDC85AQ96PX6 553 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms