RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	DOT1L	Q8TEK3	1739 aa		11.75	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ARFGEF2	Q9Y6D5	1785 aa		11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ANP32A	P39687	249 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	EPHA10	Q5JZY3	1008 aa		11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	TTC22	Q5TAA0	569 aa		11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	PROM2	Q8N271	834 aa		11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	IPO9	Q96P70	1041 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	LRRCC1	Q9C099	1032 aa		11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	BICC1	Q9H694	974 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-223	ENST00000556142	CHD4	Q14839	1912 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142		H7C1W4	665 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	APBB1	O00213	710 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	STARD3NL	O95772	234 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	PTF1A	Q7RTS3	328 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	NPM2	Q86SE8	214 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ACSBG1	Q96GR2	724 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ISCA1	Q9BUE6	129 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	MTFR1L	Q9H019	292 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	SBF2	Q86WG5	1849 aa		11.73	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ATP5J2-PTCD1	G3V325	749 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	SURF6	O75683	361 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	PDE1A	P54750	535 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	SLC15A2	Q16348	729 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	RABL6	Q3YEC7	729 aa	Predicted RBP	11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	RHPN1	Q8TCX5	695 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	SYTL4	Q96C24	671 aa	Predicted RBP	11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	STAP2	Q9UGK3	403 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	TJP1	Q07157	1748 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	UTRN	P46939	3433 aa		11.72	□□□□□ -0.53
HNRNPC-223	ENST00000556142	TRIM28	Q13263	835 aa	Known RBP	11.71	□□□□□ -0.53
HNRNPC-223	ENST00000556142	TCIRG1	Q13488	830 aa		11.71	□□□□□ -0.53
HNRNPC-223	ENST00000556142	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.71	□□□□□ -0.53
HNRNPC-223	ENST00000556142	CIC	Q96RK0	1608 aa	Predicted RBP	11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	RFX5	P48382	616 aa	Predicted RBP	11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TXNRD1	Q16881	649 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CCDC191	Q8NCU4	936 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	KIF1BP	Q96EK5	621 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TBC1D32	Q96NH3	1257 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	SGIP1	Q9BQI5	828 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ZBTB3	Q9H5J0	574 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ZBTB1	Q9Y2K1	713 aa		11.71	□□□□□ -0.54
HNRNPC-223	ENST00000556142		A0A087WZG4	1122 aa		11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	FOXO4	P98177	505 aa		11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	HSP90AB4P	Q58FF6	505 aa		11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	INTS5	Q6P9B9	1019 aa	Known RBP	11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	JARID2	Q92833	1246 aa	Predicted RBP	11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ARX	Q96QS3	562 aa		11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CWC25	Q9NXE8	425 aa	Predicted RBP	11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PA2G4	Q9UQ80	394 aa	Known RBP	11.7	□□□□□ -0.54
HNRNPC-223	ENST00000556142	MAP3K15	Q6ZN16	1313 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	LOC102724428	A0A0B4J2F2	783 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	SDS	P20132	328 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	IL6ST	P40189	918 aa	Predicted RBP	11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	SIK1	P57059	783 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ITPK1	Q13572	414 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TBC1D9	Q6ZT07	1266 aa		11.69	□□□□□ -0.54
HNRNPC-223	ENST00000556142	AOX1	Q06278	1338 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	SASH1	O94885	1247 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	MX1	P20591	662 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	EIF5	P55010	431 aa	Known RBP	11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	HLF	Q16534	295 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	GPR162	Q16538	588 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	UBE3B	Q7Z3V4	1068 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	SMARCC1	Q92922	1105 aa	Predicted RBP	11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	IL1RAPL2	Q9NP60	686 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	COPRS	Q9NQ92	184 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	USP42	Q9H9J4	1324 aa	Known RBP	11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CEP350	Q5VT06	3117 aa		11.68	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ERVV-1	B6SEH8	477 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CDC45	O75419	566 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ATP6V1A	P38606	617 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PTPN12	Q05209	780 aa	Known RBP	11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	KIF6	Q6ZMV9	814 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PALLD	Q8WX93	1383 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	AFDN	P55196	1824 aa	Known RBP	11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ERC1	Q8IUD2	1116 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PI4K2B	Q8TCG2	481 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	DDRGK1	Q96HY6	314 aa		11.67	□□□□□ -0.54
HNRNPC-223	ENST00000556142	ZNF831	Q5JPB2	1677 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	MFAP1	P55081	439 aa	Known RBP	11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TSHZ3	Q63HK5	1081 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	NUTM1	Q86Y26	1132 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PLA2G12B	Q9BX93	195 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	C22orf23	Q9BZE7	217 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CCDC87	Q9NVE4	849 aa		11.66	□□□□□ -0.54
HNRNPC-223	ENST00000556142	PCCA	P05165	728 aa	Predicted RBP	11.65	□□□□□ -0.54
HNRNPC-223	ENST00000556142	CRKL	P46109	303 aa	Known RBP	11.65	□□□□□ -0.54
HNRNPC-223	ENST00000556142	RBM25	P49756	843 aa	Known RBP	11.65	□□□□□ -0.54
HNRNPC-223	ENST00000556142	KLHDC4	Q8TBB5	520 aa		11.65	□□□□□ -0.54
HNRNPC-223	ENST00000556142	TUBGCP6	Q96RT7	1819 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	4e-10	■□□□□ 8.8
HNRNPC-223	ENST00000556142	HSP90AB3P	Q58FF7	597 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	LMBR1L	Q6UX01	489 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	NLRP10	Q86W26	655 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	ZNF34	Q8IZ26	560 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	BCL11A	Q9H165	835 aa		11.64	□□□□□ -0.55
HNRNPC-223	ENST00000556142	UPF2	Q9HAU5	1272 aa	Known RBP	11.64	□□□□□ -0.55

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