RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CC2D2BQ6DHV5 1058 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 SYNE4Q8N205 404 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 PSMD1Q99460 953 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 PPP1R42Q7Z4L9 355 aa24.69■■□□□ 1.54
CDKN3-209ENST00000556102 TAF1DQ9H5J8 278 aaPredicted RBP24.68■■□□□ 1.54
CDKN3-209ENST00000556102 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 PCNTO95613 3336 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 FZD9O00144 591 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 PROSER3Q2NL68 480 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 LDHDQ86WU2 507 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 RBM17Q96I25 401 aaKnown RBP24.67■■□□□ 1.54
CDKN3-209ENST00000556102 CRAMP1Q96RY5 1269 aa24.67■■□□□ 1.54
CDKN3-209ENST00000556102 ANXA1P04083 346 aa24.66■■□□□ 1.54
CDKN3-209ENST00000556102 CCDC146Q8IYE0 955 aa24.66■■□□□ 1.54
CDKN3-209ENST00000556102 GRIPAP1Q4V328 841 aa24.65■■□□□ 1.54
CDKN3-209ENST00000556102 HACL1Q9UJ83 578 aa24.65■■□□□ 1.54
CDKN3-209ENST00000556102 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
CDKN3-209ENST00000556102 C3orf67Q6ZVT6 689 aa24.64■■□□□ 1.54
CDKN3-209ENST00000556102 JDP2Q8WYK2 163 aa24.64■■□□□ 1.54
CDKN3-209ENST00000556102 CREBZFQ9NS37 354 aa24.64■■□□□ 1.54
CDKN3-209ENST00000556102 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
CDKN3-209ENST00000556102 WDR43Q15061 677 aaKnown RBP eCLIP24.63■■□□□ 1.53
CDKN3-209ENST00000556102 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
CDKN3-209ENST00000556102 NLRP3Q96P20 1036 aa24.63■■□□□ 1.53
CDKN3-209ENST00000556102 UTP14AQ9BVJ6 771 aaKnown RBP24.63■■□□□ 1.53
CDKN3-209ENST00000556102 RNF123Q5XPI4 1314 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 CHL1O00533 1208 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 HSP90AB3PQ58FF7 597 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 SLC10A5Q5PT55 438 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 GPC2Q8N158 579 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 NECTIN2Q92692 538 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 COL4A5P29400 1685 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 ADAMTSL1Q8N6G6 1762 aa24.62■■□□□ 1.53
CDKN3-209ENST00000556102 EPHX2P34913 555 aa24.61■■□□□ 1.53
CDKN3-209ENST00000556102 EAPPQ56P03 285 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-209ENST00000556102 COPS6Q7L5N1 327 aa24.61■■□□□ 1.53
CDKN3-209ENST00000556102 DDX21Q9NR30 783 aaKnown RBP eCLIP24.61■■□□□ 1.53
CDKN3-209ENST00000556102 TRIM35Q9UPQ4 493 aa24.61■■□□□ 1.53
CDKN3-209ENST00000556102 PASKQ96RG2 1323 aa24.61■■□□□ 1.53
CDKN3-209ENST00000556102 LAMB2P55268 1798 aa24.6■■□□□ 1.53
CDKN3-209ENST00000556102 AIMP1Q12904 312 aaKnown RBP24.6■■□□□ 1.53
CDKN3-209ENST00000556102 XAGE3Q8WTP9 111 aa24.6■■□□□ 1.53
CDKN3-209ENST00000556102 TCERG1O14776 1098 aaKnown RBP24.59■■□□□ 1.53
CDKN3-209ENST00000556102 EIF6P56537 245 aaKnown RBP24.59■■□□□ 1.53
CDKN3-209ENST00000556102 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
CDKN3-209ENST00000556102 HSPA1AP0DMV8 641 aaKnown RBP24.58■■□□□ 1.53
CDKN3-209ENST00000556102 HSPA1BP0DMV9 641 aaKnown RBP24.58■■□□□ 1.53
CDKN3-209ENST00000556102 COL13A1Q5TAT6 717 aaPredicted RBP24.58■■□□□ 1.53
CDKN3-209ENST00000556102 SLC51AQ86UW1 340 aa24.58■■□□□ 1.53
CDKN3-209ENST00000556102 PNMA8AQ86V59 439 aaPredicted RBP24.58■■□□□ 1.53
CDKN3-209ENST00000556102 NLRP10Q86W26 655 aa24.58■■□□□ 1.53
CDKN3-209ENST00000556102 LARGE2Q8N3Y3 721 aa24.58■■□□□ 1.53
CDKN3-209ENST00000556102 ADAMTS8Q9UP79 889 aa24.58■■□□□ 1.53
CDKN3-209ENST00000556102 LAS1LQ9Y4W2 734 aaKnown RBP24.58■■□□□ 1.53
CDKN3-209ENST00000556102 TCIRG1Q13488 830 aa24.57■■□□□ 1.52
CDKN3-209ENST00000556102 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
CDKN3-209ENST00000556102 CLEC11AQ9Y240 323 aa24.57■■□□□ 1.52
CDKN3-209ENST00000556102 ABCC4O15439 1325 aa24.57■■□□□ 1.52
CDKN3-209ENST00000556102 ITGBL1O95965 494 aaPredicted RBP24.56■■□□□ 1.52
CDKN3-209ENST00000556102 MKRN1Q9UHC7 482 aaKnown RBP24.56■■□□□ 1.52
CDKN3-209ENST00000556102 ATP6V0A2Q9Y487 856 aa24.56■■□□□ 1.52
CDKN3-209ENST00000556102 HOXB7P09629 217 aa24.55■■□□□ 1.52
CDKN3-209ENST00000556102 CHPF2Q9P2E5 772 aa24.55■■□□□ 1.52
CDKN3-209ENST00000556102 GJA3Q9Y6H8 435 aa24.55■■□□□ 1.52
CDKN3-209ENST00000556102 HDGFL1Q5TGJ6 251 aa24.54■■□□□ 1.52
CDKN3-209ENST00000556102 NIM1KQ8IY84 436 aa24.54■■□□□ 1.52
CDKN3-209ENST00000556102 TRMT112Q9UI30 125 aaKnown RBP24.54■■□□□ 1.52
CDKN3-209ENST00000556102 LTBP1Q14766 1721 aa24.54■■□□□ 1.52
CDKN3-209ENST00000556102 CNTNAP1P78357 1384 aa24.54■■□□□ 1.52
CDKN3-209ENST00000556102 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
CDKN3-209ENST00000556102 VPS33BQ9H267 617 aa24.53■■□□□ 1.52
CDKN3-209ENST00000556102 PRKRIP1Q9H875 184 aaPredicted RBP24.53■■□□□ 1.52
CDKN3-209ENST00000556102 SH3TC1Q8TE82 1336 aa24.53■■□□□ 1.52
CDKN3-209ENST00000556102 TMEM88BA6NKF7 163 aa24.52■■□□□ 1.52
CDKN3-209ENST00000556102 PPIP5K2O43314 1243 aa24.52■■□□□ 1.52
CDKN3-209ENST00000556102 BBOX1O75936 387 aa24.52■■□□□ 1.52
CDKN3-209ENST00000556102 LMOD1P29536 600 aaPredicted RBP24.52■■□□□ 1.52
CDKN3-209ENST00000556102 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
CDKN3-209ENST00000556102 CNTROBQ8N137 903 aa24.51■■□□□ 1.51
CDKN3-209ENST00000556102 SUPT20HQ8NEM7 779 aa24.51■■□□□ 1.51
CDKN3-209ENST00000556102 PLBD2Q8NHP8 589 aa24.51■■□□□ 1.51
CDKN3-209ENST00000556102 RTFDC1Q9BY42 306 aaPredicted RBP24.51■■□□□ 1.51
CDKN3-209ENST00000556102 SCNN1DP51172 638 aa24.5■■□□□ 1.51
CDKN3-209ENST00000556102 AOC3Q16853 763 aa24.5■■□□□ 1.51
CDKN3-209ENST00000556102 MAP1SQ66K74 1059 aaPredicted RBP24.5■■□□□ 1.51
CDKN3-209ENST00000556102 DDX46Q7L014 1031 aaKnown RBP24.5■■□□□ 1.51
CDKN3-209ENST00000556102 SP8Q8IXZ3 490 aa24.5■■□□□ 1.51
CDKN3-209ENST00000556102 DBF4Q9UBU7 674 aaPredicted RBP24.5■■□□□ 1.51
CDKN3-209ENST00000556102 DDX60Q8IY21 1712 aaKnown RBP24.49■■□□□ 1.51
CDKN3-209ENST00000556102 TAF1P21675 1872 aa24.49■■□□□ 1.51
CDKN3-209ENST00000556102 GRAPQ13588 217 aa24.49■■□□□ 1.51
CDKN3-209ENST00000556102 ANKRD13DQ6ZTN6 518 aa24.49■■□□□ 1.51
CDKN3-209ENST00000556102 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
CDKN3-209ENST00000556102 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
CDKN3-209ENST00000556102 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
CDKN3-209ENST00000556102 EPS15P42566 896 aa24.47■■□□□ 1.51
CDKN3-209ENST00000556102 TNS4Q8IZW8 715 aa24.47■■□□□ 1.51
CDKN3-209ENST00000556102 MPNDQ8N594 471 aa24.47■■□□□ 1.51
CDKN3-209ENST00000556102 ISCA1Q9BUE6 129 aa24.47■■□□□ 1.51
CDKN3-209ENST00000556102 MBIPQ9NS73 344 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms