RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 AAMPQ13685 434 aa12.65□□□□□ -0.38
NEK9-205ENST00000555405 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
NEK9-205ENST00000555405 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■□□□□ 8.1
NEK9-205ENST00000555405 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
NEK9-205ENST00000555405 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
NEK9-205ENST00000555405 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
NEK9-205ENST00000555405 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
NEK9-205ENST00000555405 CCDC57Q2TAC2 916 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
NEK9-205ENST00000555405 CHD1LQ86WJ1 897 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 NARFQ9UHQ1 456 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 BRWD3Q6RI45 1802 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
NEK9-205ENST00000555405 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
NEK9-205ENST00000555405 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
NEK9-205ENST00000555405 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 H7C1W4 665 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
NEK9-205ENST00000555405 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
NEK9-205ENST00000555405 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
NEK9-205ENST00000555405 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 PLSCR1O15162 318 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
NEK9-205ENST00000555405 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
NEK9-205ENST00000555405 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
NEK9-205ENST00000555405 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
NEK9-205ENST00000555405 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
NEK9-205ENST00000555405 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
NEK9-205ENST00000555405 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
NEK9-205ENST00000555405 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
NEK9-205ENST00000555405 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
NEK9-205ENST00000555405 IFIT5Q13325 482 aaKnown RBP12.6□□□□□ -0.39
NEK9-205ENST00000555405 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 LRRCC1Q9C099 1032 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 BTAF1O14981 1849 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 NFIXQ14938 502 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
NEK9-205ENST00000555405 GREM2Q9H772 168 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 PDE4AP27815 886 aa12.6□□□□□ -0.39
NEK9-205ENST00000555405 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
NEK9-205ENST00000555405 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
NEK9-205ENST00000555405 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
NEK9-205ENST00000555405 ITGA6P23229 1130 aa12.58□□□□□ -0.39
NEK9-205ENST00000555405 LRRC24Q50LG9 513 aa12.58□□□□□ -0.39
NEK9-205ENST00000555405 PARP10Q53GL7 1025 aa12.58□□□□□ -0.39
NEK9-205ENST00000555405 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.39
NEK9-205ENST00000555405 RHPN1Q8TCX5 695 aa12.58□□□□□ -0.39
NEK9-205ENST00000555405 FOXO4P98177 505 aa12.58□□□□□ -0.4
NEK9-205ENST00000555405 NUCB1Q02818 461 aa12.58□□□□□ -0.4
NEK9-205ENST00000555405 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
NEK9-205ENST00000555405 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
NEK9-205ENST00000555405 GYS1P13807 737 aa12.58□□□□□ -0.4
NEK9-205ENST00000555405 AACSQ86V21 672 aa12.58□□□□□ -0.4
NEK9-205ENST00000555405 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 USP42Q9H9J4 1324 aaKnown RBP12.57□□□□□ -0.4
NEK9-205ENST00000555405 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 PDE8AO60658 829 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
NEK9-205ENST00000555405 CLASRPQ8N2M8 674 aaKnown RBP12.57□□□□□ -0.4
NEK9-205ENST00000555405 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 SNAP23O00161 211 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 TRIM28Q13263 835 aaKnown RBP12.57□□□□□ -0.4
NEK9-205ENST00000555405 CLEC4GQ6UXB4 293 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
NEK9-205ENST00000555405 ANKRD18BA2A2Z9 1011 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 SERPINB2P05120 415 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 CASP7P55210 303 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 CTSWP56202 376 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 TFCP2Q12800 502 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 TTLL11Q8NHH1 800 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
NEK9-205ENST00000555405 MMP10P09238 476 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 TIMM10P62072 90 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 ZBTB7AO95365 584 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms