RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 ERMNQ8TAM6 284 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 RAD50Q92878 1312 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 HECW2Q9P2P5 1572 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 TMCO5BA8MYB1 307 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 VPS36Q86VN1 386 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
LINC00641-201ENST00000555379 K7ELQ4 463 aaPredicted RBP9.78□□□□□ -0.84
LINC00641-201ENST00000555379 ZNF213O14771 459 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
LINC00641-201ENST00000555379 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 UQCRHLA0A096LP55 91 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 PTCD1O75127 700 aaKnown RBP9.78□□□□□ -0.84
LINC00641-201ENST00000555379 UQCRHP07919 91 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 KSR2Q6VAB6 950 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 HOMER1Q86YM7 354 aa9.78□□□□□ -0.84
LINC00641-201ENST00000555379 XPCQ01831 940 aaPredicted RBP9.77□□□□□ -0.85
LINC00641-201ENST00000555379 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.85
LINC00641-201ENST00000555379 LDHAL6AQ6ZMR3 332 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.85
LINC00641-201ENST00000555379 TIGD1Q96MW7 591 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 KIF2AO00139 706 aaPredicted RBP9.77□□□□□ -0.85
LINC00641-201ENST00000555379 BICDL1Q6ZP65 573 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 PPFIBP1Q86W92 1011 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 LINS1Q8NG48 757 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 RTL9Q8NET4 1388 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 ARHGEF6Q15052 776 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 ZNF397Q8NF99 534 aaPredicted RBP9.77□□□□□ -0.85
LINC00641-201ENST00000555379 CCDC87Q9NVE4 849 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 ABCF2Q9UG63 623 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 PLEKHG3A1L390 1219 aa9.77□□□□□ -0.85
LINC00641-201ENST00000555379 TTC41PQ6P2S7 1318 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 FAM114A1Q8IWE2 563 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 FEZ1Q99689 392 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 RARSP54136 660 aaKnown RBP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 TMED8Q6PL24 325 aaPredicted RBP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 SIL1Q9H173 461 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 NPHP4O75161 1426 aaPredicted RBP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 CCDC172P0C7W6 258 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 DDX12PQ92771 950 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC00641-201ENST00000555379 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
LINC00641-201ENST00000555379 MYOM2P54296 1465 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 NBPF7P0C2Y1 421 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 JAKMIP3Q5VZ66 844 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 LRRC45Q96CN5 670 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 KCNG1Q9UIX4 513 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 CCDC171Q6TFL3 1326 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 CCDC194A0A1B0GVG4 234 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 ERVV-2B6SEH9 535 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 DKC1O60832 514 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 GCP02774 474 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 SSRP1Q08945 709 aaKnown RBP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 FAM107BQ9H098 131 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 TSPY26PQ9H489 355 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 GCC2Q8IWJ2 1684 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
LINC00641-201ENST00000555379 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-201ENST00000555379 CASTP20810 708 aaKnown RBP9.74□□□□□ -0.85
LINC00641-201ENST00000555379 ANAPC15P60006 121 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 CCDC96Q2M329 555 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 NCOA7Q8NI08 942 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 MRVI1Q9Y6F6 885 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 GRIPAP1Q4V328 841 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 PAF1Q8N7H5 531 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 FERMT1Q9BQL6 677 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 LIG1P18858 919 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 RBM26Q5T8P6 1007 aaKnown RBP9.74□□□□□ -0.85
LINC00641-201ENST00000555379 ESR2Q92731 530 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 CALML4Q96GE6 196 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 ZC3H12CQ9C0D7 883 aaKnown RBP9.74□□□□□ -0.85
LINC00641-201ENST00000555379 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 DENND2AQ9ULE3 1009 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 MAP3K2Q9Y2U5 619 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 EPB41L2O43491 1005 aaKnown RBP9.74□□□□□ -0.85
LINC00641-201ENST00000555379 PPP1R2P41236 205 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 DDX11Q96FC9 970 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
LINC00641-201ENST00000555379 ANKARQ7Z5J8 1434 aa9.74□□□□□ -0.85
LINC00641-201ENST00000555379 TTC6Q86TZ1 520 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 KIAA0754O94854 1291 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ZFYVE27Q5T4F4 411 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 MCM10Q7L590 875 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 CALML3P27482 149 aa9.73□□□□□ -0.85
LINC00641-201ENST00000555379 ALDH1B1P30837 517 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms