RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 RFX7Q2KHR2 1363 aa25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 H7C1W4 665 aa25.64■■□□□ 1.7
ARHGEF40-204ENST00000555038 TTC14Q96N46 770 aa25.64■■□□□ 1.7
ARHGEF40-204ENST00000555038 CCDC8Q9H0W5 538 aaPredicted RBP25.64■■□□□ 1.7
ARHGEF40-204ENST00000555038 SIL1Q9H173 461 aa25.64■■□□□ 1.7
ARHGEF40-204ENST00000555038 BRD1O95696 1058 aa25.64■■□□□ 1.69
ARHGEF40-204ENST00000555038 EVA1CP58658 441 aa25.64■■□□□ 1.69
ARHGEF40-204ENST00000555038 PKP1Q13835 747 aa25.64■■□□□ 1.69
ARHGEF40-204ENST00000555038 CCDC171Q6TFL3 1326 aa25.63■■□□□ 1.69
ARHGEF40-204ENST00000555038 XRCC6P12956 609 aaKnown RBP eCLIP25.63■■□□□ 1.69
ARHGEF40-204ENST00000555038 MCTP1Q6DN14 999 aa25.63■■□□□ 1.69
ARHGEF40-204ENST00000555038 DDX49Q9Y6V7 483 aaKnown RBP25.63■■□□□ 1.69
ARHGEF40-204ENST00000555038 ATP5JP18859 108 aa25.62■■□□□ 1.69
ARHGEF40-204ENST00000555038 PIP4K2AP48426 406 aaPredicted RBP25.62■■□□□ 1.69
ARHGEF40-204ENST00000555038 CWC25Q9NXE8 425 aaPredicted RBP25.62■■□□□ 1.69
ARHGEF40-204ENST00000555038 LMBRD1Q9NUN5 540 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 ATP5J2-PTCD1G3V325 749 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 PTCD1O75127 700 aaKnown RBP25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 TNNI3KQ59H18 835 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 TICAM2Q86XR7 235 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 TLR7Q9NYK1 1049 aaKnown RBP25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 FPGT-TNNI3KV9GXZ4 949 aa25.61■■□□□ 1.69
ARHGEF40-204ENST00000555038 RASEFQ8IZ41 740 aa25.6■■□□□ 1.69
ARHGEF40-204ENST00000555038 KLHDC4Q8TBB5 520 aa25.6■■□□□ 1.69
ARHGEF40-204ENST00000555038 ZKSCAN1P17029 563 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 TEX13AQ9BXU3 409 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 GRPEL1Q9HAV7 217 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 STRN4Q9NRL3 753 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 LIMCH1Q9UPQ0 1083 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 TJP1Q07157 1748 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 NECTIN1Q15223 517 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 VPS53Q5VIR6 699 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 VSIG10Q8N0Z9 540 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 DDX54Q8TDD1 881 aaKnown RBP25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 MAP4K1Q92918 833 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 FSD1Q9BTV5 496 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 TOGARAM1Q9Y4F4 1720 aa25.59■■□□□ 1.69
ARHGEF40-204ENST00000555038 PTH1RQ03431 593 aa25.58■■□□□ 1.69
ARHGEF40-204ENST00000555038 BOLA2Q9H3K6 86 aa25.58■■□□□ 1.69
ARHGEF40-204ENST00000555038 GPR108Q9NPR9 543 aa25.58■■□□□ 1.69
ARHGEF40-204ENST00000555038 JCADQ9P266 1359 aa25.58■■□□□ 1.69
ARHGEF40-204ENST00000555038 MED23Q9ULK4 1368 aa25.58■■□□□ 1.69
ARHGEF40-204ENST00000555038 FOXO4P98177 505 aa25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 NMIQ13287 307 aaPredicted RBP25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 ZSWIM6Q9HCJ5 1215 aa25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 ATG3Q9NT62 314 aa25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 TMOD3Q9NYL9 352 aa25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 WDR33Q9C0J8 1336 aaKnown RBP25.57■■□□□ 1.68
ARHGEF40-204ENST00000555038 AK2P54819 239 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 TFCP2Q12800 502 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 TTLL7Q6ZT98 887 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 ZSCAN31Q96LW9 406 aaPredicted RBP25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 DBNLQ9UJU6 430 aaKnown RBP25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 RNF20Q5VTR2 975 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 LMBR1LQ6UX01 489 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 CYP46A1Q9Y6A2 500 aa25.56■■□□□ 1.68
ARHGEF40-204ENST00000555038 A1BGP04217 495 aa25.55■■□□□ 1.68
ARHGEF40-204ENST00000555038 PRPF40BQ6NWY9 871 aaKnown RBP25.55■■□□□ 1.68
ARHGEF40-204ENST00000555038 RBM8AQ9Y5S9 174 aaKnown RBP25.55■■□□□ 1.68
ARHGEF40-204ENST00000555038 COL14A1Q05707 1796 aaKnown RBP25.55■■□□□ 1.68
ARHGEF40-204ENST00000555038 CASTP20810 708 aaKnown RBP25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 PSMA5P28066 241 aa25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 NOL8Q76FK4 1167 aaKnown RBP25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 SH2B1Q9NRF2 756 aaPredicted RBP25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 FAM227BQ96M60 508 aa25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 HMG20BQ9P0W2 317 aa25.54■■□□□ 1.68
ARHGEF40-204ENST00000555038 LRP6O75581 1613 aa25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 ZNF445P59923 1031 aa25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 TRIM28Q13263 835 aaKnown RBP25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 CREB3L3Q68CJ9 461 aa25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 JARID2Q92833 1246 aaPredicted RBP25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 JAKMIP1Q96N16 626 aaKnown RBP25.53■■□□□ 1.68
ARHGEF40-204ENST00000555038 RPAP1Q9BWH6 1393 aaPredicted RBP25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 MBD3O95983 291 aa25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 IL15P40933 162 aaPredicted RBP25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 RUFY3Q7L099 469 aa25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 PDRG1Q9NUG6 133 aa25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 DISP2A7MBM2 1401 aa25.52■■□□□ 1.68
ARHGEF40-204ENST00000555038 CIAO1O76071 339 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 KCNJ4P48050 445 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 HAUS7Q99871 368 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 A0A0D9SFI3 127 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 TSGA10IPQ3SY00 556 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 FBXO3Q9UK99 471 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 PLCH1Q4KWH8 1693 aa25.51■■□□□ 1.67
ARHGEF40-204ENST00000555038 PRPF40AO75400 957 aaKnown RBP25.5■■□□□ 1.67
ARHGEF40-204ENST00000555038 FAM43AQ8N2R8 423 aa25.5■■□□□ 1.67
ARHGEF40-204ENST00000555038 PDIA4P13667 645 aaKnown RBP25.49■■□□□ 1.67
ARHGEF40-204ENST00000555038 COL22A1Q8NFW1 1626 aaPredicted RBP25.49■■□□□ 1.67
ARHGEF40-204ENST00000555038 SLC27A2O14975 620 aa25.49■■□□□ 1.67
ARHGEF40-204ENST00000555038 TCIRG1Q13488 830 aa25.49■■□□□ 1.67
ARHGEF40-204ENST00000555038 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
ARHGEF40-204ENST00000555038 ANKRD1Q15327 319 aa25.48■■□□□ 1.67
ARHGEF40-204ENST00000555038 USPL1Q5W0Q7 1092 aa25.48■■□□□ 1.67
ARHGEF40-204ENST00000555038 ATG9AQ7Z3C6 839 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 2062.8 ms