RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 HSPA1AP0DMV8 641 aaKnown RBP12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 HSPA1BP0DMV9 641 aaKnown RBP12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 HLFQ16534 295 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
SRP54-AS1-201ENST00000554945 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
SRP54-AS1-201ENST00000554945 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
SRP54-AS1-201ENST00000554945 LDHDQ86WU2 507 aa12.45□□□□□ -0.42
SRP54-AS1-201ENST00000554945 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
SRP54-AS1-201ENST00000554945 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
SRP54-AS1-201ENST00000554945 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
SRP54-AS1-201ENST00000554945 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
SRP54-AS1-201ENST00000554945 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
SRP54-AS1-201ENST00000554945 PASKQ96RG2 1323 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 FZD9O00144 591 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 PSMD1Q99460 953 aa12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-201ENST00000554945 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 GPC2Q8N158 579 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 CNTNAP1P78357 1384 aa12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
SRP54-AS1-201ENST00000554945 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 MYL6BP14649 208 aa12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 EPHX2P34913 555 aa12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 ADAMTSL1Q8N6G6 1762 aa12.4□□□□□ -0.42
SRP54-AS1-201ENST00000554945 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 SNED1Q8TER0 1413 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 GPTP24298 496 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 HOXA10P31260 410 aaPredicted RBP12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 ZNF34Q8IZ26 560 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 ZBTB3Q9H5J0 574 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
SRP54-AS1-201ENST00000554945 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 EIF6P56537 245 aaKnown RBP12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PPP1R42Q7Z4L9 355 aa12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 THUMPD2Q9BTF0 503 aaKnown RBP12.38□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
SRP54-AS1-201ENST00000554945 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 NTSR2O95665 410 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 VEGFBP49765 207 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 LARGE2Q8N3Y3 721 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 BABAM1Q9NWV8 329 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
SRP54-AS1-201ENST00000554945 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
SRP54-AS1-201ENST00000554945 FOXN1O15353 648 aa12.35□□□□□ -0.43
SRP54-AS1-201ENST00000554945 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
SRP54-AS1-201ENST00000554945 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
SRP54-AS1-201ENST00000554945 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
SRP54-AS1-201ENST00000554945 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 RIPK4P57078 832 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PDIA6Q15084 440 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 COL4A5P29400 1685 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
SRP54-AS1-201ENST00000554945 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 SCNN1DP51172 638 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 LMOD3Q0VAK6 560 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms