RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 IGHA2P01877 340 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 FAM157BP0CG42 384 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 ERCC3P19447 782 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
FOXN3-206ENST00000554005 FOXD4L4Q8WXT5 416 aaPredicted RBP8.98□□□□□ -0.97
FOXN3-206ENST00000554005 PIK3R5Q8WYR1 880 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 RTCBQ9Y3I0 505 aaKnown RBP8.98□□□□□ -0.97
FOXN3-206ENST00000554005 PCDHGC4Q9Y5F7 938 aa8.98□□□□□ -0.97
FOXN3-206ENST00000554005 EFSO43281 561 aa8.97□□□□□ -0.97
FOXN3-206ENST00000554005 USP5P45974 858 aa8.97□□□□□ -0.97
FOXN3-206ENST00000554005 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
FOXN3-206ENST00000554005 DCDC2BA2VCK2 349 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 EPB42P16452 691 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 PCSK2P16519 638 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 PDE3BQ13370 1112 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 TRIP4Q15650 581 aaPredicted RBP8.96□□□□□ -0.98
FOXN3-206ENST00000554005 TMC1Q8TDI8 760 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 GTPBP3Q969Y2 492 aaKnown RBP8.96□□□□□ -0.98
FOXN3-206ENST00000554005 GGNBP2Q9H3C7 697 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 HCN2Q9UL51 889 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 KCNMB2Q9Y691 235 aa8.96□□□□□ -0.98
FOXN3-206ENST00000554005 KHNYNO15037 678 aaKnown RBP8.95□□□□□ -0.98
FOXN3-206ENST00000554005 GPR182O15218 404 aa8.95□□□□□ -0.98
FOXN3-206ENST00000554005 BNIP3LO60238 219 aa8.95□□□□□ -0.98
FOXN3-206ENST00000554005 KCNQ4P56696 695 aa8.95□□□□□ -0.98
FOXN3-206ENST00000554005 TNP2Q05952 138 aa8.95□□□□□ -0.98
FOXN3-206ENST00000554005 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
FOXN3-206ENST00000554005 A6NHS1 94 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 TREHO43280 583 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 RPLP1P05386 114 aaKnown RBP8.94□□□□□ -0.98
FOXN3-206ENST00000554005 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
FOXN3-206ENST00000554005 SFSWAPQ12872 951 aaKnown RBP8.94□□□□□ -0.98
FOXN3-206ENST00000554005 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 ABHD17AQ96GS6 310 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 DMRTB1Q96MA1 342 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 STRN4Q9NRL3 753 aa8.94□□□□□ -0.98
FOXN3-206ENST00000554005 CDC14CA4D256 554 aa8.93□□□□□ -0.98
FOXN3-206ENST00000554005 UBAP1LF5GYI3 381 aa8.93□□□□□ -0.98
FOXN3-206ENST00000554005 DSC3Q14574 896 aa8.93□□□□□ -0.98
FOXN3-206ENST00000554005 VWA5B2Q8N398 1253 aa8.93□□□□□ -0.98
FOXN3-206ENST00000554005 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
FOXN3-206ENST00000554005 EHHADHQ08426 723 aa8.92□□□□□ -0.98
FOXN3-206ENST00000554005 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
FOXN3-206ENST00000554005 ALKBH8Q96BT7 664 aaKnown RBP8.92□□□□□ -0.98
FOXN3-206ENST00000554005 ATXN7L1Q9ULK2 861 aaPredicted RBP8.92□□□□□ -0.98
FOXN3-206ENST00000554005 FNDC3AQ9Y2H6 1198 aaKnown RBP8.92□□□□□ -0.98
FOXN3-206ENST00000554005 XYLBO75191 536 aa8.91□□□□□ -0.98
FOXN3-206ENST00000554005 P4HBP07237 508 aaKnown RBP8.91□□□□□ -0.98
FOXN3-206ENST00000554005 FMR1Q06787 632 aaKnown RBP eCLIP8.91□□□□□ -0.98
FOXN3-206ENST00000554005 GRIN2CQ14957 1233 aa8.91□□□□□ -0.98
FOXN3-206ENST00000554005 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
FOXN3-206ENST00000554005 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
FOXN3-206ENST00000554005 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
FOXN3-206ENST00000554005 AMOTL2Q9Y2J4 779 aa8.91□□□□□ -0.98
FOXN3-206ENST00000554005 GPR25O00155 361 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 EGFRP00533 1210 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 CD33P20138 364 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 VEGFBP49765 207 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 COL19A1Q14993 1142 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 PDE12Q6L8Q7 609 aaKnown RBP8.9□□□□□ -0.98
FOXN3-206ENST00000554005 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 NIF3L1Q9GZT8 377 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 MARK1Q9P0L2 795 aa8.9□□□□□ -0.98
FOXN3-206ENST00000554005 NXF1Q9UBU9 619 aaKnown RBP8.9□□□□□ -0.98
FOXN3-206ENST00000554005 PLCB3Q01970 1234 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 XKR5Q6UX68 686 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 ZNF438Q7Z4V0 828 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 FBXO33Q7Z6M2 555 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 TRERF1Q96PN7 1200 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 CFHR5Q9BXR6 569 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 PHF24Q9UPV7 400 aa8.89□□□□□ -0.99
FOXN3-206ENST00000554005 FGFR3P22607 806 aa8.88□□□□□ -0.99
FOXN3-206ENST00000554005 FOXR1Q6PIV2 292 aa8.88□□□□□ -0.99
FOXN3-206ENST00000554005 GSX2Q9BZM3 304 aa8.88□□□□□ -0.99
FOXN3-206ENST00000554005 ELP3Q9H9T3 547 aa8.88□□□□□ -0.99
FOXN3-206ENST00000554005 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
FOXN3-206ENST00000554005 H3BM21 787 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 TNFRSF21O75509 655 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 SPEM2Q0P670 501 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 ORC1Q13415 861 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 CCINQ13939 588 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 NPAS3Q8IXF0 933 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 SLC30A3Q99726 388 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
FOXN3-206ENST00000554005 SASH3O75995 380 aa8.86□□□□□ -0.99
FOXN3-206ENST00000554005 MAPK8P45983 427 aa8.86□□□□□ -0.99
FOXN3-206ENST00000554005 EAPPQ56P03 285 aaPredicted RBP8.86□□□□□ -0.99
FOXN3-206ENST00000554005 FAM182BQ5T319 152 aa8.86□□□□□ -0.99
FOXN3-206ENST00000554005 NLRP13Q86W25 1043 aa8.86□□□□□ -0.99
FOXN3-206ENST00000554005 SNX29Q8TEQ0 813 aa8.86□□□□□ -0.99
FOXN3-206ENST00000554005 FOXD3Q9UJU5 478 aaPredicted RBP8.86□□□□□ -0.99
FOXN3-206ENST00000554005 ZNF16P17020 682 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms