RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 UBE3BQ7Z3V4 1068 aa17.51■□□□□ 0.39
ABCD4-219ENST00000553745 SMC5Q8IY18 1101 aa17.51■□□□□ 0.39
ABCD4-219ENST00000553745 JARID2Q92833 1246 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-219ENST00000553745 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
ABCD4-219ENST00000553745 CASP7P55210 303 aa17.51■□□□□ 0.39
ABCD4-219ENST00000553745 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
ABCD4-219ENST00000553745 MYH3P11055 1940 aa17.5■□□□□ 0.39
ABCD4-219ENST00000553745 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
ABCD4-219ENST00000553745 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
ABCD4-219ENST00000553745 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
ABCD4-219ENST00000553745 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
ABCD4-219ENST00000553745 LAMB2P55268 1798 aa17.49■□□□□ 0.39
ABCD4-219ENST00000553745 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-219ENST00000553745 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
ABCD4-219ENST00000553745 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
ABCD4-219ENST00000553745 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
ABCD4-219ENST00000553745 H7C1W4 665 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 ZNF827Q17R98 1081 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
ABCD4-219ENST00000553745 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
ABCD4-219ENST00000553745 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
ABCD4-219ENST00000553745 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
ABCD4-219ENST00000553745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.47■□□□□ 0.39
ABCD4-219ENST00000553745 HMMRO75330 724 aa17.47■□□□□ 0.39
ABCD4-219ENST00000553745 SEC24BO95487 1268 aa17.47■□□□□ 0.39
ABCD4-219ENST00000553745 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
ABCD4-219ENST00000553745 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
ABCD4-219ENST00000553745 EPHA10Q5JZY3 1008 aa17.47■□□□□ 0.39
ABCD4-219ENST00000553745 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
ABCD4-219ENST00000553745 ADRA2BP18089 450 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 SSFA2P28290 1259 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 MTX1Q13505 466 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
ABCD4-219ENST00000553745 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 ZPR1O75312 459 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-219ENST00000553745 RFC4P35249 363 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
ABCD4-219ENST00000553745 RGL2O15211 777 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
ABCD4-219ENST00000553745 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
ABCD4-219ENST00000553745 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-219ENST00000553745 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
ABCD4-219ENST00000553745 POLA2Q14181 598 aa17.44■□□□□ 0.38
ABCD4-219ENST00000553745 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
ABCD4-219ENST00000553745 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
ABCD4-219ENST00000553745 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 BAG6P46379 1132 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-219ENST00000553745 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
ABCD4-219ENST00000553745 CDHR2Q9BYE9 1310 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 FOXO4P98177 505 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 NUCB1Q02818 461 aa17.43■□□□□ 0.38
ABCD4-219ENST00000553745 NTSR2O95665 410 aa17.42■□□□□ 0.38
ABCD4-219ENST00000553745 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
ABCD4-219ENST00000553745 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
ABCD4-219ENST00000553745 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
ABCD4-219ENST00000553745 ANO8Q9HCE9 1232 aaPredicted RBP17.41■□□□□ 0.38
ABCD4-219ENST00000553745 NBR1Q14596 966 aa17.4■□□□□ 0.38
ABCD4-219ENST00000553745 LMBR1LQ6UX01 489 aa17.4■□□□□ 0.38
ABCD4-219ENST00000553745 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
ABCD4-219ENST00000553745 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
ABCD4-219ENST00000553745 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-219ENST00000553745 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
ABCD4-219ENST00000553745 APBB1O00213 710 aa17.39■□□□□ 0.37
ABCD4-219ENST00000553745 GYS1P13807 737 aa17.39■□□□□ 0.37
ABCD4-219ENST00000553745 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
ABCD4-219ENST00000553745 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
ABCD4-219ENST00000553745 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
ABCD4-219ENST00000553745 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
ABCD4-219ENST00000553745 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-219ENST00000553745 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
ABCD4-219ENST00000553745 TNRC6CQ9HCJ0 1690 aaKnown RBP17.37■□□□□ 0.37
ABCD4-219ENST00000553745 CTSWP56202 376 aa17.37■□□□□ 0.37
ABCD4-219ENST00000553745 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-219ENST00000553745 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
ABCD4-219ENST00000553745 CARMIL3Q8ND23 1372 aa17.36■□□□□ 0.37
ABCD4-219ENST00000553745 ABCC12Q96J65 1359 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms