RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 NARFQ9UHQ1 456 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 C4AP0C0L4 1744 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 POLA2Q14181 598 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
APEX1-205ENST00000553555 BICC1Q9H694 974 aaKnown RBP17.14■□□□□ 0.33
APEX1-205ENST00000553555 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
APEX1-205ENST00000553555 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
APEX1-205ENST00000553555 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
APEX1-205ENST00000553555 SKAP1Q86WV1 359 aa17.13■□□□□ 0.33
APEX1-205ENST00000553555 ZNF652Q9Y2D9 606 aa17.13■□□□□ 0.33
APEX1-205ENST00000553555 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
APEX1-205ENST00000553555 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
APEX1-205ENST00000553555 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
APEX1-205ENST00000553555 MYH3P11055 1940 aa17.11■□□□□ 0.33
APEX1-205ENST00000553555 ADRA2BP18089 450 aa17.11■□□□□ 0.33
APEX1-205ENST00000553555 NUCB1Q02818 461 aa17.11■□□□□ 0.33
APEX1-205ENST00000553555 BCL2L12Q9HB09 334 aa17.11■□□□□ 0.33
APEX1-205ENST00000553555 ZPR1O75312 459 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
APEX1-205ENST00000553555 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
APEX1-205ENST00000553555 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
APEX1-205ENST00000553555 FOXO4P98177 505 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
APEX1-205ENST00000553555 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
APEX1-205ENST00000553555 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 PHF14O94880 888 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 SSFA2P28290 1259 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 RFC4P35249 363 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 SUSD4Q5VX71 490 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
APEX1-205ENST00000553555 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
APEX1-205ENST00000553555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
APEX1-205ENST00000553555 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
APEX1-205ENST00000553555 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
APEX1-205ENST00000553555 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
APEX1-205ENST00000553555 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
APEX1-205ENST00000553555 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
APEX1-205ENST00000553555 SURF6O75683 361 aaKnown RBP17.07■□□□□ 0.32
APEX1-205ENST00000553555 RGS3P49796 1198 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
APEX1-205ENST00000553555 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
APEX1-205ENST00000553555 PDE4AP27815 886 aa17.06■□□□□ 0.32
APEX1-205ENST00000553555 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
APEX1-205ENST00000553555 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
APEX1-205ENST00000553555 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
APEX1-205ENST00000553555 DDX60Q8IY21 1712 aaKnown RBP17.05■□□□□ 0.32
APEX1-205ENST00000553555 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
APEX1-205ENST00000553555 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
APEX1-205ENST00000553555 NTSR2O95665 410 aa17.05■□□□□ 0.32
APEX1-205ENST00000553555 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
APEX1-205ENST00000553555 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
APEX1-205ENST00000553555 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
APEX1-205ENST00000553555 LAMB2P55268 1798 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 FAM177BA6PVY3 158 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 APBB1O00213 710 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 CSF1RP07333 972 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
APEX1-205ENST00000553555 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
APEX1-205ENST00000553555 PDE8AO60658 829 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 BAG6P46379 1132 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
APEX1-205ENST00000553555 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
APEX1-205ENST00000553555 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
APEX1-205ENST00000553555 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
APEX1-205ENST00000553555 CASZ1Q86V15 1759 aa17.02■□□□□ 0.32
APEX1-205ENST00000553555 GYS1P13807 737 aa17.02■□□□□ 0.31
APEX1-205ENST00000553555 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.31
APEX1-205ENST00000553555 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.31
APEX1-205ENST00000553555 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.311e-8■■■□□ 18.5
APEX1-205ENST00000553555 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
APEX1-205ENST00000553555 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
APEX1-205ENST00000553555 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
APEX1-205ENST00000553555 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
APEX1-205ENST00000553555 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
APEX1-205ENST00000553555 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
APEX1-205ENST00000553555 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
APEX1-205ENST00000553555 CTSWP56202 376 aa17■□□□□ 0.31
APEX1-205ENST00000553555 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
APEX1-205ENST00000553555 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
APEX1-205ENST00000553555 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
APEX1-205ENST00000553555 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
APEX1-205ENST00000553555 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
APEX1-205ENST00000553555 NYXQ9GZU5 481 aa17■□□□□ 0.31
APEX1-205ENST00000553555 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
APEX1-205ENST00000553555 NFIXQ14938 502 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms