RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-208ENST00000553278 RHBDD1Q8TEB9 315 aa8.47□□□□□ -1.05
SCFD1-208ENST00000553278 ZSWIM4Q9H7M6 989 aa8.47□□□□□ -1.05
SCFD1-208ENST00000553278 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
SCFD1-208ENST00000553278 A0A0G2JS52 829 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 A6NHS1 94 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 WNT7AO00755 349 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 ST13P50502 369 aaKnown RBP8.46□□□□□ -1.06
SCFD1-208ENST00000553278 GNASQ5JWF2 1037 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 PPP1R18Q6NYC8 613 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 KDF1Q8NAX2 398 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-208ENST00000553278 RHPN1Q8TCX5 695 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
SCFD1-208ENST00000553278 MCF2L2Q86YR7 1114 aa8.45□□□□□ -1.06
SCFD1-208ENST00000553278 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
SCFD1-208ENST00000553278 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
SCFD1-208ENST00000553278 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
SCFD1-208ENST00000553278 SRCIN1Q9C0H9 1055 aa8.45□□□□□ -1.06
SCFD1-208ENST00000553278 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.45□□□□□ -1.06
SCFD1-208ENST00000553278 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
SCFD1-208ENST00000553278 TNFRSF21O75509 655 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-208ENST00000553278 TXLNAP40222 546 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 GJA8P48165 433 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 CBLBQ13191 982 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 NNTQ13423 1086 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 NBPF1Q3BBV0 1214 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 SDE2Q6IQ49 451 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 Q6ZVU0 165 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 EPS8L3Q8TE67 593 aaKnown RBP8.44□□□□□ -1.06
SCFD1-208ENST00000553278 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
SCFD1-208ENST00000553278 FGRP09769 529 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 MEI1Q5TIA1 1274 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 IER5Q5VY09 327 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 PDE12Q6L8Q7 609 aaKnown RBP8.43□□□□□ -1.06
SCFD1-208ENST00000553278 PI16Q6UXB8 463 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 ZNF438Q7Z4V0 828 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 FOXD3Q9UJU5 478 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-208ENST00000553278 GPC6Q9Y625 555 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-208ENST00000553278 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
SCFD1-208ENST00000553278 PHACTR2O75167 634 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 ATF4P18848 351 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-208ENST00000553278 PLA2G4AP47712 749 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 PAK2Q13177 524 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
SCFD1-208ENST00000553278 Q6ZNB5 142 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 PIF1Q9H611 641 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 ZFYVE28Q9HCC9 887 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
SCFD1-208ENST00000553278 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-208ENST00000553278 IRS1P35568 1242 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 IDH3AP50213 366 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 ARSDP51689 593 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 RELBQ01201 579 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 TBX22Q9Y458 520 aa8.41□□□□□ -1.06
SCFD1-208ENST00000553278 UBAP1LF5GYI3 381 aa8.4□□□□□ -1.06
SCFD1-208ENST00000553278 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-208ENST00000553278 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-208ENST00000553278 GPC1P35052 558 aa8.4□□□□□ -1.06
SCFD1-208ENST00000553278 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
SCFD1-208ENST00000553278 ERMP1Q7Z2K6 904 aa8.4□□□□□ -1.06
SCFD1-208ENST00000553278 CKAP2LQ8IYA6 745 aa8.4□□□□□ -1.06
SCFD1-208ENST00000553278 BCO2Q9BYV7 579 aa8.39□□□□□ -1.07
SCFD1-208ENST00000553278 GRIP2Q9C0E4 1043 aa8.39□□□□□ -1.07
SCFD1-208ENST00000553278 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-208ENST00000553278 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
SCFD1-208ENST00000553278 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
SCFD1-208ENST00000553278 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
SCFD1-208ENST00000553278 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCFD1-208ENST00000553278 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 CLSTN1O94985 981 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-208ENST00000553278 BMS1Q14692 1282 aaKnown RBP8.38□□□□□ -1.07
SCFD1-208ENST00000553278 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 ZNF746Q6NUN9 644 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-208ENST00000553278 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
SCFD1-208ENST00000553278 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 MRFAP1L1Q96HT8 127 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
SCFD1-208ENST00000553278 RTCBQ9Y3I0 505 aaKnown RBP8.38□□□□□ -1.07
SCFD1-208ENST00000553278 GSTT1P30711 240 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms