RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 NBPF10Q6P3W6 841 aaKnown RBP10.73□□□□□ -0.69
PCNX1-203ENST00000553272 NBPF15Q8N660 670 aa10.73□□□□□ -0.69
PCNX1-203ENST00000553272 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
PCNX1-203ENST00000553272 NIP7Q9Y221 180 aaKnown RBP eCLIP10.73□□□□□ -0.69
PCNX1-203ENST00000553272 CLSPNQ9HAW4 1339 aa10.73□□□□□ -0.69
PCNX1-203ENST00000553272 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
PCNX1-203ENST00000553272 SCNN1DP51172 638 aa10.72□□□□□ -0.69
PCNX1-203ENST00000553272 PRPF38BQ5VTL8 546 aaKnown RBP10.72□□□□□ -0.69
PCNX1-203ENST00000553272 PHACTR3Q96KR7 559 aa10.72□□□□□ -0.69
PCNX1-203ENST00000553272 TLL2Q9Y6L7 1015 aa10.72□□□□□ -0.69
PCNX1-203ENST00000553272 FAM177BA6PVY3 158 aa10.71□□□□□ -0.69
PCNX1-203ENST00000553272 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
PCNX1-203ENST00000553272 MAP2K2P36507 400 aa10.71□□□□□ -0.69
PCNX1-203ENST00000553272 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
PCNX1-203ENST00000553272 HLFQ16534 295 aa10.71□□□□□ -0.69
PCNX1-203ENST00000553272 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
PCNX1-203ENST00000553272 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
PCNX1-203ENST00000553272 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-203ENST00000553272 HOXA10P31260 410 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-203ENST00000553272 CC2D1BQ5T0F9 858 aaKnown RBP10.7□□□□□ -0.7
PCNX1-203ENST00000553272 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-203ENST00000553272 KIF7Q2M1P5 1343 aa10.69□□□□□ -0.7
PCNX1-203ENST00000553272 TRIM26Q12899 539 aaPredicted RBP10.69□□□□□ -0.7
PCNX1-203ENST00000553272 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
PCNX1-203ENST00000553272 CIAPIN1Q6FI81 312 aa10.69□□□□□ -0.7
PCNX1-203ENST00000553272 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
PCNX1-203ENST00000553272 NUP98P52948 1817 aa10.69□□□□□ -0.7
PCNX1-203ENST00000553272 ABCC12Q96J65 1359 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 CA12O43570 354 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 GTF2E1P29083 439 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-203ENST00000553272 SLC51AQ86UW1 340 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 HHIPL1Q96JK4 782 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
PCNX1-203ENST00000553272 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 MCM10Q7L590 875 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 CRAMP1Q96RY5 1269 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 GPRC5DQ9NZD1 345 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 PGAP2Q9UHJ9 254 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
PCNX1-203ENST00000553272 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
PCNX1-203ENST00000553272 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
PCNX1-203ENST00000553272 CELF2O95319 508 aaKnown RBP10.66□□□□□ -0.7
PCNX1-203ENST00000553272 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
PCNX1-203ENST00000553272 VPS33BQ9H267 617 aa10.66□□□□□ -0.7
PCNX1-203ENST00000553272 ADARB2Q9NS39 739 aaKnown RBP10.66□□□□□ -0.7
PCNX1-203ENST00000553272 CXCL9Q07325 125 aa10.65□□□□□ -0.7
PCNX1-203ENST00000553272 DCTN1Q14203 1278 aa10.65□□□□□ -0.7
PCNX1-203ENST00000553272 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
PCNX1-203ENST00000553272 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.7
PCNX1-203ENST00000553272 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.71
PCNX1-203ENST00000553272 MKI67P46013 3256 aaKnown RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 PPIP5K2O43314 1243 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 HTATSF1O43719 755 aaKnown RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 AOC3Q16853 763 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 SUSD4Q5VX71 490 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 C3orf67Q6ZVT6 689 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 RTF1Q92541 710 aaKnown RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 GLIS2Q9BZE0 524 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-203ENST00000553272 ZNRF3Q9ULT6 936 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
PCNX1-203ENST00000553272 LAMB2P55268 1798 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
PCNX1-203ENST00000553272 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
PCNX1-203ENST00000553272 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 ZC3H15Q8WU90 426 aaKnown RBP10.63□□□□□ -0.71
PCNX1-203ENST00000553272 RTFDC1Q9BY42 306 aaPredicted RBP10.63□□□□□ -0.71
PCNX1-203ENST00000553272 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 ATP6V0A2Q9Y487 856 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 TAF1P21675 1872 aa10.63□□□□□ -0.71
PCNX1-203ENST00000553272 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
PCNX1-203ENST00000553272 NTSR2O95665 410 aa10.62□□□□□ -0.71
PCNX1-203ENST00000553272 GPTP24298 496 aa10.62□□□□□ -0.71
PCNX1-203ENST00000553272 CDHR2Q9BYE9 1310 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 NOGQ13253 232 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-203ENST00000553272 SLC10A5Q5PT55 438 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 DLK2Q6UY11 383 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 GIGYF2Q6Y7W6 1299 aaKnown RBP10.61□□□□□ -0.71
PCNX1-203ENST00000553272 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 ZBTB3Q9H5J0 574 aa10.61□□□□□ -0.71
PCNX1-203ENST00000553272 RRP7AQ9Y3A4 280 aaKnown RBP10.61□□□□□ -0.71
PCNX1-203ENST00000553272 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-203ENST00000553272 U2AF1L5P0DN76 240 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-203ENST00000553272 U2AF1Q01081 240 aaKnown RBP eCLIP10.6□□□□□ -0.71
PCNX1-203ENST00000553272 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 KIF6Q6ZMV9 814 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms