RNA–Protein interactions for RNA: ENST00000552938.1

MRPL42-210, Transcript of mitochondrial ribosomal protein L42, human

TSL 2

Gene MRPL42, Length 999 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL42-210	ENST00000552938	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
MRPL42-210	ENST00000552938	ABCC4	O15439	1325 aa		13.53	□□□□□ -0.24
MRPL42-210	ENST00000552938	CARMIL3	Q8ND23	1372 aa		13.53	□□□□□ -0.24
MRPL42-210	ENST00000552938	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL42-210	ENST00000552938	NRXN2	Q9P2S2	1712 aa		13.53	□□□□□ -0.24
MRPL42-210	ENST00000552938	POLRMT	O00411	1230 aa	Known RBP	13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	IGKV5-2	P06315	115 aa		13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	PTGER2	P43116	358 aa		13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	ATF7IP	Q6VMQ6	1270 aa		13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	BICDL1	Q6ZP65	573 aa		13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	MYD88	Q99836	296 aa		13.52	□□□□□ -0.25
MRPL42-210	ENST00000552938	ATP5J2-PTCD1	G3V325	749 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	IPO8	O15397	1037 aa	Known RBP	13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	TRIM28	Q13263	835 aa	Known RBP	13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	PARP10	Q53GL7	1025 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	BEND3	Q5T5X7	828 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	NLRP10	Q86W26	655 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	LINS1	Q8NG48	757 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	SSUH2	Q9Y2M2	353 aa		13.51	□□□□□ -0.25
MRPL42-210	ENST00000552938	LRP5	O75197	1615 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	C10orf71	Q711Q0	1435 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	NEURL1B	A8MQ27	555 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	NTSR2	O95665	410 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	NEXN	Q0ZGT2	675 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	CWF19L2	Q2TBE0	894 aa	Known RBP	13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	SUSD4	Q5VX71	490 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	SETDB2	Q96T68	719 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	SPON1	Q9HCB6	807 aa		13.5	□□□□□ -0.25
MRPL42-210	ENST00000552938	ABCC12	Q96J65	1359 aa		13.49	□□□□□ -0.25
MRPL42-210	ENST00000552938	SERPINB2	P05120	415 aa		13.49	□□□□□ -0.25
MRPL42-210	ENST00000552938	SLC4A10	Q6U841	1118 aa		13.49	□□□□□ -0.25
MRPL42-210	ENST00000552938	RNF123	Q5XPI4	1314 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	PLIN1	O60240	522 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	ALDH1L1	O75891	902 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	RLBP1	P12271	317 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	POLD1	P28340	1107 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	RRP1	P56182	461 aa	Known RBP	13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	PRR5L	Q6MZQ0	368 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	CCDC191	Q8NCU4	936 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	CLUAP1	Q96AJ1	413 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	SRCIN1	Q9C0H9	1055 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	CWC25	Q9NXE8	425 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	PARP3	Q9Y6F1	533 aa		13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	AFDN	P55196	1824 aa	Known RBP	13.48	□□□□□ -0.25
MRPL42-210	ENST00000552938	RIC1	Q4ADV7	1423 aa		13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	CCT4	P50991	539 aa	Known RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	GCKR	Q14397	625 aa		13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	INTS3	Q68E01	1043 aa	Known RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	DZIP1L	Q8IYY4	767 aa	Known RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	CNBD1	Q8NA66	436 aa		13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	UTP14A	Q9BVJ6	771 aa	Known RBP	13.47	□□□□□ -0.25
MRPL42-210	ENST00000552938	FAM177B	A6PVY3	158 aa		13.46	□□□□□ -0.25
MRPL42-210	ENST00000552938	PPP1R42	Q7Z4L9	355 aa		13.46	□□□□□ -0.25
MRPL42-210	ENST00000552938	NUTM1	Q86Y26	1132 aa		13.46	□□□□□ -0.25
MRPL42-210	ENST00000552938	TMEM57	Q8N5G2	664 aa		13.46	□□□□□ -0.25
MRPL42-210	ENST00000552938	NYX	Q9GZU5	481 aa		13.46	□□□□□ -0.25
MRPL42-210	ENST00000552938	LAMB2	P55268	1798 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	SH3TC1	Q8TE82	1336 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	PCCA	P05165	728 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	CASP7	P55210	303 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	ERFE	Q4G0M1	354 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	C20orf194	Q5TEA3	1177 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	FTSJ3	Q8IY81	847 aa	Known RBP	13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	PANK1	Q8TE04	598 aa		13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	TRMT112	Q9UI30	125 aa	Known RBP	13.45	□□□□□ -0.26
MRPL42-210	ENST00000552938	ANKRD31	Q8N7Z5	1873 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	UTY	O14607	1347 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	CDHR2	Q9BYE9	1310 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	KIF13B	Q9NQT8	1826 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938		H7C1W4	665 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	PDE3A	Q14432	1141 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	TPTE2	Q6XPS3	522 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	UBE3B	Q7Z3V4	1068 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	SYNE4	Q8N205	404 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	CCDC24	Q8N4L8	307 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	FAM89A	Q96GI7	184 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	DDX60	Q8IY21	1712 aa	Known RBP	13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	KIAA1551	Q9HCM1	1747 aa		13.44	□□□□□ -0.26
MRPL42-210	ENST00000552938	GRM8	O00222	908 aa		13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	MS4A1	P11836	297 aa		13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	ST5	P78524	1137 aa		13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	JARID2	Q92833	1246 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	USP44	Q9H0E7	712 aa		13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.43	□□□□□ -0.26
MRPL42-210	ENST00000552938	COL11A2	P13942	1736 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	CENPB	P07199	599 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	VASP	P50552	380 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	RTL5	Q5HYW3	569 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	SLC10A5	Q5PT55	438 aa		13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	C3orf67	Q6ZVT6	689 aa		13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	ITPRIP	Q8IWB1	547 aa		13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	MEIS3	Q99687	375 aa		13.42	□□□□□ -0.26
MRPL42-210	ENST00000552938	IRS4	O14654	1257 aa	Predicted RBP	13.41	□□□□□ -0.26
MRPL42-210	ENST00000552938	NPHP1	O15259	732 aa		13.41	□□□□□ -0.26
MRPL42-210	ENST00000552938	GTF2E1	P29083	439 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms