RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
NPAS3-209ENST00000551008 AIMP1Q12904 312 aaKnown RBP16.99■□□□□ 0.31
NPAS3-209ENST00000551008 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
NPAS3-209ENST00000551008 NYXQ9GZU5 481 aa16.99■□□□□ 0.31
NPAS3-209ENST00000551008 COL4A1P02462 1669 aa16.99■□□□□ 0.31
NPAS3-209ENST00000551008 COL4A5P29400 1685 aa16.99■□□□□ 0.31
NPAS3-209ENST00000551008 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
NPAS3-209ENST00000551008 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
NPAS3-209ENST00000551008 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
NPAS3-209ENST00000551008 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
NPAS3-209ENST00000551008 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.31
NPAS3-209ENST00000551008 GNAI1P63096 354 aa16.96■□□□□ 0.31
NPAS3-209ENST00000551008 PARP10Q53GL7 1025 aa16.96■□□□□ 0.31
NPAS3-209ENST00000551008 TAOK3Q9H2K8 898 aa16.96■□□□□ 0.31
NPAS3-209ENST00000551008 POTECB2RU33 542 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-209ENST00000551008 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 SLC10A5Q5PT55 438 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
NPAS3-209ENST00000551008 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 GLTPD2A6NH11 291 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 ELL2O00472 640 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-209ENST00000551008 ANP32CO43423 234 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 TOMM70O94826 608 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 CCDC93Q567U6 631 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
NPAS3-209ENST00000551008 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-209ENST00000551008 HSPA6P17066 643 aa16.93■□□□□ 0.3
NPAS3-209ENST00000551008 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
NPAS3-209ENST00000551008 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
NPAS3-209ENST00000551008 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
NPAS3-209ENST00000551008 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
NPAS3-209ENST00000551008 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
NPAS3-209ENST00000551008 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
NPAS3-209ENST00000551008 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
NPAS3-209ENST00000551008 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
NPAS3-209ENST00000551008 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
NPAS3-209ENST00000551008 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 DUOX1Q9NRD9 1551 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
NPAS3-209ENST00000551008 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 ZNF277Q9NRM2 450 aaPredicted RBP16.91■□□□□ 0.3
NPAS3-209ENST00000551008 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
NPAS3-209ENST00000551008 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
NPAS3-209ENST00000551008 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
NPAS3-209ENST00000551008 SCN4AP35499 1836 aa16.9■□□□□ 0.3
NPAS3-209ENST00000551008 ABCC4O15439 1325 aa16.9■□□□□ 0.3
NPAS3-209ENST00000551008 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
NPAS3-209ENST00000551008 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
NPAS3-209ENST00000551008 IL16Q14005 1332 aa16.89■□□□□ 0.29
NPAS3-209ENST00000551008 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
NPAS3-209ENST00000551008 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
NPAS3-209ENST00000551008 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
NPAS3-209ENST00000551008 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
NPAS3-209ENST00000551008 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
NPAS3-209ENST00000551008 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
NPAS3-209ENST00000551008 PSMD1Q99460 953 aa16.87■□□□□ 0.29
NPAS3-209ENST00000551008 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
NPAS3-209ENST00000551008 MYH3P11055 1940 aa16.86■□□□□ 0.29
NPAS3-209ENST00000551008 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
NPAS3-209ENST00000551008 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
NPAS3-209ENST00000551008 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
NPAS3-209ENST00000551008 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
NPAS3-209ENST00000551008 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
NPAS3-209ENST00000551008 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
NPAS3-209ENST00000551008 FZD9O00144 591 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
NPAS3-209ENST00000551008 POTEIP0CG38 1075 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 POTEJP0CG39 1038 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 FSTL1Q12841 308 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 CCDC30Q5VVM6 783 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 G2E3Q7L622 706 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
NPAS3-209ENST00000551008 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
NPAS3-209ENST00000551008 GOLGA2Q08379 1002 aa16.83■□□□□ 0.28
NPAS3-209ENST00000551008 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
NPAS3-209ENST00000551008 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
NPAS3-209ENST00000551008 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
NPAS3-209ENST00000551008 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
NPAS3-209ENST00000551008 MYD88Q99836 296 aa16.83■□□□□ 0.28
NPAS3-209ENST00000551008 SPEF2Q9C093 1822 aa16.83■□□□□ 0.28
NPAS3-209ENST00000551008 HTRA3P83110 453 aa16.82■□□□□ 0.28
NPAS3-209ENST00000551008 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
NPAS3-209ENST00000551008 DPY19L2Q6NUT2 758 aa16.82■□□□□ 0.28
NPAS3-209ENST00000551008 WDR63Q8IWG1 891 aa16.82■□□□□ 0.28
NPAS3-209ENST00000551008 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
NPAS3-209ENST00000551008 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms