RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 VTI1BQ9UEU0 232 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 WWC3Q9ULE0 1092 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 BCORL1Q5H9F3 1711 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 PNMA6FA0A0J9YX94 578 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 J3QL48 77 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 GPR182O15218 404 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 PDGFAP04085 211 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
CPSF6-206ENST00000550987 PLA2G4AP47712 749 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 HIF1AQ16665 826 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 NBPF1Q3BBV0 1214 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 FAM26DQ5JW98 314 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 ALG1LQ6GMV1 187 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 SPNS2Q8IVW8 549 aa8.21□□□□□ -1.1
CPSF6-206ENST00000550987 ALKBH8Q96BT7 664 aaKnown RBP8.21□□□□□ -1.1
CPSF6-206ENST00000550987 UPP2O95045 317 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
CPSF6-206ENST00000550987 YY1P25490 414 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
CPSF6-206ENST00000550987 GJD3Q8N144 294 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 PIK3R5Q8WYR1 880 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
CPSF6-206ENST00000550987 MAGI1Q96QZ7 1491 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 TATP17735 454 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 TXLNAP40222 546 aa8.19□□□□□ -1.1
CPSF6-206ENST00000550987 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 C9orf131Q5VYM1 1079 aa8.19□□□□□ -1.1
CPSF6-206ENST00000550987 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
CPSF6-206ENST00000550987 TMC4Q7Z404 712 aa8.19□□□□□ -1.1
CPSF6-206ENST00000550987 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 POLMQ9NP87 494 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 PPP1R1BQ9UD71 204 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-206ENST00000550987 GLI2P10070 1586 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 MICAL2O94851 1124 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 TIMP2P16035 220 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 GPC1P35052 558 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 PHKA2P46019 1235 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 DAB2P98082 770 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 ENOX2Q16206 610 aaKnown RBP8.18□□□□□ -1.1
CPSF6-206ENST00000550987 DRC1Q96MC2 740 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 TSEN34Q9BSV6 310 aaKnown RBP8.18□□□□□ -1.1
CPSF6-206ENST00000550987 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
CPSF6-206ENST00000550987 CSRNP1Q96S65 589 aa8.17□□□□□ -1.1
CPSF6-206ENST00000550987 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
CPSF6-206ENST00000550987 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
CPSF6-206ENST00000550987 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
CPSF6-206ENST00000550987 TOPBP1Q92547 1522 aa8.17□□□□□ -1.1
CPSF6-206ENST00000550987 TNFRSF10AO00220 468 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 IGHA2P01877 340 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-206ENST00000550987 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 ZNF295-AS1Q8N0V1 137 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 RNF19AQ9NV58 838 aa8.16□□□□□ -1.1
CPSF6-206ENST00000550987 FNDC3AQ9Y2H6 1198 aaKnown RBP8.16□□□□□ -1.1
CPSF6-206ENST00000550987 PREX1Q8TCU6 1659 aa8.15□□□□□ -1.1
CPSF6-206ENST00000550987 LRP5O75197 1615 aa8.15□□□□□ -1.1
CPSF6-206ENST00000550987 TEX14Q8IWB6 1497 aa8.15□□□□□ -1.1
CPSF6-206ENST00000550987 HDLBPQ00341 1268 aaKnown RBP8.15□□□□□ -1.1
CPSF6-206ENST00000550987 ARSJQ5FYB0 599 aaPredicted RBP8.15□□□□□ -1.1
CPSF6-206ENST00000550987 SREK1Q8WXA9 508 aaKnown RBP8.15□□□□□ -1.1
CPSF6-206ENST00000550987 RNF34Q969K3 372 aa8.15□□□□□ -1.1
CPSF6-206ENST00000550987 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.1
CPSF6-206ENST00000550987 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.1
CPSF6-206ENST00000550987 EIF1AYO14602 144 aaKnown RBP8.14□□□□□ -1.11
CPSF6-206ENST00000550987 GNA15P30679 374 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 ORC1Q13415 861 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 MEIOBQ8N635 442 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 FBF1Q8TES7 1133 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 SUSD3Q96L08 255 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 FRMD6Q96NE9 622 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 SPG7Q9UQ90 795 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
CPSF6-206ENST00000550987 CFTRP13569 1480 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 A6NHS1 94 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 CAPN5O15484 640 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-206ENST00000550987 CPNE3O75131 537 aaKnown RBP8.13□□□□□ -1.11
CPSF6-206ENST00000550987 SMPD1P17405 629 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 POU4F2Q12837 409 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
CPSF6-206ENST00000550987 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 ZDHHC3Q9NYG2 299 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 BCS1LQ9Y276 419 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 GJA3Q9Y6H8 435 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 CEP350Q5VT06 3117 aa8.13□□□□□ -1.11
CPSF6-206ENST00000550987 OPLAHO14841 1288 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 GDF9O60383 454 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 BMP2P12643 396 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 ZNF76P36508 570 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 IDH3AP50213 366 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
CPSF6-206ENST00000550987 NT5DC4Q86YG4 428 aa8.12□□□□□ -1.11
CPSF6-206ENST00000550987 ZNF280CQ8ND82 737 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms