RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 SAP130Q9H0E3 1048 aa8.34□□□□□ -1.07
RAB3IP-214ENST00000550847 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.07
RAB3IP-214ENST00000550847 IRS1P35568 1242 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 COX20Q5RI15 118 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 IER5Q5VY09 327 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 MKNK1Q9BUB5 465 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 PRR12Q9ULL5 1215 aa8.33□□□□□ -1.08
RAB3IP-214ENST00000550847 RASSF7Q02833 373 aa8.32□□□□□ -1.08
RAB3IP-214ENST00000550847 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
RAB3IP-214ENST00000550847 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
RAB3IP-214ENST00000550847 CARNS1A5YM72 827 aa8.31□□□□□ -1.08
RAB3IP-214ENST00000550847 INPP5BP32019 993 aa8.31□□□□□ -1.08
RAB3IP-214ENST00000550847 SCARF2Q96GP6 870 aaPredicted RBP8.31□□□□□ -1.08
RAB3IP-214ENST00000550847 BTBD6Q96KE9 485 aa8.31□□□□□ -1.08
RAB3IP-214ENST00000550847 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
RAB3IP-214ENST00000550847 SCNN1AP37088 669 aa8.3□□□□□ -1.08
RAB3IP-214ENST00000550847 IDH3AP50213 366 aa8.3□□□□□ -1.08
RAB3IP-214ENST00000550847 HIF1AQ16665 826 aa8.3□□□□□ -1.08
RAB3IP-214ENST00000550847 CHSY3Q70JA7 882 aa8.3□□□□□ -1.08
RAB3IP-214ENST00000550847 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 SIN3BO75182 1162 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 MICAL2O94851 1124 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 DGKGP49619 791 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 LINC00114Q6XXX2 140 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 RRAGCQ9HB90 399 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
RAB3IP-214ENST00000550847 OPLAHO14841 1288 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 AMPD1P23109 780 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 ETFBKMTQ8IXQ9 262 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 COL26A1Q96A83 441 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 GSX2Q9BZM3 304 aa8.28□□□□□ -1.08
RAB3IP-214ENST00000550847 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 GDF11O95390 407 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 BEND7Q8N7W2 519 aaPredicted RBP8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 BHMTQ93088 406 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 IFT43Q96FT9 208 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 SUV39H2Q9H5I1 410 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
RAB3IP-214ENST00000550847 ADARB2-AS1A8MUL3 147 aa8.26□□□□□ -1.09
RAB3IP-214ENST00000550847 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
RAB3IP-214ENST00000550847 COL8A1P27658 744 aa8.26□□□□□ -1.09
RAB3IP-214ENST00000550847 TREML1Q86YW5 311 aa8.26□□□□□ -1.09
RAB3IP-214ENST00000550847 STARD13Q9Y3M8 1113 aa8.26□□□□□ -1.09
RAB3IP-214ENST00000550847 ARSDP51689 593 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 PODNQ7Z5L7 613 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 TMEM151AQ8N4L1 468 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 ZFATQ9P243 1243 aa8.25□□□□□ -1.09
RAB3IP-214ENST00000550847 PHF20L1A8MW92 1017 aa8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 ITGB2P05107 769 aa8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 NFKB1P19838 968 aa8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 ADH7P40394 386 aa8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 ARID3AQ99856 593 aa8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 RTCBQ9Y3I0 505 aaKnown RBP8.24□□□□□ -1.09
RAB3IP-214ENST00000550847 ZBTB39O15060 712 aa8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 CCINQ13939 588 aa8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 MKL2Q9ULH7 1088 aa8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
RAB3IP-214ENST00000550847 ALBP02768 609 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 KCNMB2Q9Y691 235 aa8.22□□□□□ -1.09
RAB3IP-214ENST00000550847 PTCD1O75127 700 aaKnown RBP8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 EPB42P16452 691 aa8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 SSFA2P28290 1259 aa8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 NEUROD1Q13562 356 aa8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 UBE2OQ9C0C9 1292 aaKnown RBP8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
RAB3IP-214ENST00000550847 GNB5O14775 395 aa8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 SASH3O75995 380 aa8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 TRIM26Q12899 539 aaPredicted RBP8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 C20orf204Q6ZNR8 217 aa8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 DNAJB12Q9NXW2 375 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 SLC6A14Q9UN76 642 aa8.2□□□□□ -1.1
RAB3IP-214ENST00000550847 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms