RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 ANKRD36BQ8N2N9 1353 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 ZBTB7AO95365 584 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 AVPP01185 164 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 IL2RBP14784 551 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 SLC15A2Q16348 729 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 RGPD3A6NKT7 1758 aaPredicted RBP8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 AKAP12Q02952 1782 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 RGPD4Q7Z3J3 1758 aa8.3□□□□□ -1.08
DEPDC4-209ENST00000550587 BCL9O00512 1426 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 HOXA2O43364 376 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 DXOO77932 396 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 USP46P62068 366 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 TRIM32Q13049 653 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 MYBBP1AQ9BQG0 1328 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-209ENST00000550587 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 A0A1W2PP64 1363 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 CCDC24Q8N4L8 307 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 SYMPKQ92797 1274 aaKnown RBP8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 ACSBG1Q96GR2 724 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
DEPDC4-209ENST00000550587 PIK3C2AO00443 1686 aa8.27□□□□□ -1.08
DEPDC4-209ENST00000550587 PEAK1Q9H792 1746 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 WNT7AO00755 349 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 AXIN1O15169 862 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 POLD1P28340 1107 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 FAM217BQ9NTX9 383 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 ABCC6O95255 1503 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 NSD3Q9BZ95 1437 aa8.27□□□□□ -1.09
DEPDC4-209ENST00000550587 KAT6BQ8WYB5 2073 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 NSD2O96028 1365 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 COL18A1P39060 1754 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 FYB1O15117 783 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 CLCN1P35523 988 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 ANKRD24Q8TF21 1146 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 MRGPRX2Q96LB1 330 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 ARXQ96QS3 562 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 SYT17Q9BSW7 474 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 MRS2Q9HD23 443 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 TNS2Q63HR2 1409 aa8.26□□□□□ -1.09
DEPDC4-209ENST00000550587 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 USP31Q70CQ4 1352 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 SMPD1P17405 629 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 GPR162Q16538 588 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 CCDC184Q52MB2 194 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 MORC1Q86VD1 984 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 NME9Q86XW9 330 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 DDX54Q8TDD1 881 aaKnown RBP8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 SLC16A10Q8TF71 515 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 SYTL4Q96C24 671 aaPredicted RBP8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 COG3Q96JB2 828 aa8.25□□□□□ -1.09
DEPDC4-209ENST00000550587 WNK3Q9BYP7 1800 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 J3QL48 77 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 PPP2R1AP30153 589 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 AMPHP49418 695 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 SKOR1P84550 965 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 IP6K1Q92551 441 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 PDGFDQ9GZP0 370 aaPredicted RBP8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 TFCP2L1Q9NZI6 479 aa8.24□□□□□ -1.09
DEPDC4-209ENST00000550587 JUNDP17535 347 aa8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 PNISRQ8TF01 805 aaKnown RBP8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 LTV1Q96GA3 475 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 NFAT5O94916 1531 aa8.23□□□□□ -1.09
DEPDC4-209ENST00000550587 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
DEPDC4-209ENST00000550587 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
DEPDC4-209ENST00000550587 NHSQ6T4R5 1651 aa8.21□□□□□ -1.09
DEPDC4-209ENST00000550587 LTN1O94822 1766 aa8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 ZCRB1Q8TBF4 217 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
DEPDC4-209ENST00000550587 SSTR3P32745 418 aaPredicted RBP8.2□□□□□ -1.1
DEPDC4-209ENST00000550587 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
DEPDC4-209ENST00000550587 RETREG3Q86VR2 466 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms