RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 SEPT7Q16181 437 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 DUOX2Q9NRD8 1548 aa18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 AOPEPQ8N6M6 819 aa18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 DCTPP1Q9H773 170 aa18.25■□□□□ 0.51
RBFOX1-212ENST00000550418 LIG1P18858 919 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 CCDC102BQ68D86 513 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 RASSF4Q9H2L5 321 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 ERO1AQ96HE7 468 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
RBFOX1-212ENST00000550418 TDO2P48775 406 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 DYDC1Q8WWB3 177 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 CTAGE15A4D2H0 777 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 POLR3DP05423 398 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 CTAGE8P0CG41 777 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 SYT1P21579 422 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 CTAGE6Q86UF2 777 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 CTAGE4Q8IX94 777 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 C10orf67Q8IYJ2 551 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 MAP2K1Q02750 393 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 PPP1R9BQ96SB3 815 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 A2MP01023 1474 aa18.23■□□□□ 0.51
RBFOX1-212ENST00000550418 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 BMP2KQ9NSY1 1161 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 ZNF500O60304 480 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 MRPS27Q92552 414 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-212ENST00000550418 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 GOLGA1Q92805 767 aa18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 C17orf53Q8N3J3 647 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 KIF6Q6ZMV9 814 aa18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 AMOTL2Q9Y2J4 779 aa18.21■□□□□ 0.51
RBFOX1-212ENST00000550418 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.5
RBFOX1-212ENST00000550418 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.5
RBFOX1-212ENST00000550418 PRDM11Q9NQV5 511 aa18.21■□□□□ 0.5
RBFOX1-212ENST00000550418 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.5
RBFOX1-212ENST00000550418 CCDC196A0A1B0GTZ2 297 aa18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 BRF1Q92994 677 aa18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 SYKP43405 635 aa18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 TTC31Q49AM3 519 aaPredicted RBP18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 NAA15Q9BXJ9 866 aaKnown RBP18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
RBFOX1-212ENST00000550418 IFIT1P09914 478 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 BCCIPQ9P287 314 aaKnown RBP eCLIP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 SPECC1Q5M775 1068 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 SSBP05455 408 aaKnown RBP eCLIP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 CCDC175P0C221 793 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 AK2P54819 239 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 HLTFQ14527 1009 aaKnown RBP eCLIP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 CEP112Q8N8E3 955 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 GNL3LQ9NVN8 582 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 PPFIA3O75145 1194 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 DNA2P51530 1060 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 KCNG4Q8TDN1 519 aa18.19■□□□□ 0.5
RBFOX1-212ENST00000550418 LMOD1P29536 600 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 VPS18Q9P253 973 aa18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 TATP17735 454 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 JADE2Q9NQC1 790 aa18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 EHBP1Q8NDI1 1231 aa18.18■□□□□ 0.5
RBFOX1-212ENST00000550418 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 EBAG9O00559 213 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 ZNF213O14771 459 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 ALS2CR12Q96Q35 445 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 TUBB4BP68371 445 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 ANKRD62A6NC57 917 aa18.17■□□□□ 0.5
RBFOX1-212ENST00000550418 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms