RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
LETMD1-221ENST00000550100 GPBP1L1Q9HC44 474 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-221ENST00000550100 FER1L6Q2WGJ9 1857 aa15.31■□□□□ 0.04
LETMD1-221ENST00000550100 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 KIF3CO14782 793 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
LETMD1-221ENST00000550100 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 IL16Q14005 1332 aa15.3■□□□□ 0.04
LETMD1-221ENST00000550100 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-221ENST00000550100 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
LETMD1-221ENST00000550100 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-221ENST00000550100 PARP10Q53GL7 1025 aa15.29■□□□□ 0.04
LETMD1-221ENST00000550100 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
LETMD1-221ENST00000550100 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
LETMD1-221ENST00000550100 LMNB1P20700 586 aa15.28■□□□□ 0.04
LETMD1-221ENST00000550100 G2E3Q7L622 706 aa15.28■□□□□ 0.04
LETMD1-221ENST00000550100 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
LETMD1-221ENST00000550100 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
LETMD1-221ENST00000550100 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.04
LETMD1-221ENST00000550100 WDR63Q8IWG1 891 aa15.27■□□□□ 0.04
LETMD1-221ENST00000550100 SNED1Q8TER0 1413 aa15.27■□□□□ 0.03
LETMD1-221ENST00000550100 RIC1Q4ADV7 1423 aa15.26■□□□□ 0.03
LETMD1-221ENST00000550100 VAMP4O75379 141 aa15.26■□□□□ 0.03
LETMD1-221ENST00000550100 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
LETMD1-221ENST00000550100 HSP90AB3PQ58FF7 597 aa15.26■□□□□ 0.03
LETMD1-221ENST00000550100 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
LETMD1-221ENST00000550100 TAF1P21675 1872 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 LAMB2P55268 1798 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
LETMD1-221ENST00000550100 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
LETMD1-221ENST00000550100 CCDC30Q5VVM6 783 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
LETMD1-221ENST00000550100 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
LETMD1-221ENST00000550100 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
LETMD1-221ENST00000550100 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
LETMD1-221ENST00000550100 CRAMP1Q96RY5 1269 aa15.24■□□□□ 0.03
LETMD1-221ENST00000550100 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
LETMD1-221ENST00000550100 COL4A1P02462 1669 aa15.24■□□□□ 0.03
LETMD1-221ENST00000550100 LTBP3Q9NS15 1303 aa15.24■□□□□ 0.03
LETMD1-221ENST00000550100 POTECB2RU33 542 aa15.23■□□□□ 0.03
LETMD1-221ENST00000550100 ALDH1B1P30837 517 aa15.23■□□□□ 0.03
LETMD1-221ENST00000550100 RPGRQ92834 1020 aaKnown RBP15.23■□□□□ 0.03
LETMD1-221ENST00000550100 NLRP3Q96P20 1036 aa15.23■□□□□ 0.03
LETMD1-221ENST00000550100 MYD88Q99836 296 aa15.23■□□□□ 0.03
LETMD1-221ENST00000550100 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
LETMD1-221ENST00000550100 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
LETMD1-221ENST00000550100 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
LETMD1-221ENST00000550100 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
LETMD1-221ENST00000550100 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
LETMD1-221ENST00000550100 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
LETMD1-221ENST00000550100 SH3TC1Q8TE82 1336 aa15.22■□□□□ 0.03
LETMD1-221ENST00000550100 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
LETMD1-221ENST00000550100 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 IGKV5-2P06315 115 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 FKBP4Q02790 459 aaKnown RBP eCLIP15.21■□□□□ 0.03
LETMD1-221ENST00000550100 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
LETMD1-221ENST00000550100 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 ABCC4O15439 1325 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 COL4A5P29400 1685 aa15.21■□□□□ 0.03
LETMD1-221ENST00000550100 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.02
LETMD1-221ENST00000550100 GLTPD2A6NH11 291 aa15.2■□□□□ 0.02
LETMD1-221ENST00000550100 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
LETMD1-221ENST00000550100 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
LETMD1-221ENST00000550100 PPEF1O14829 653 aaPredicted RBP15.2■□□□□ 0.02
LETMD1-221ENST00000550100 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
LETMD1-221ENST00000550100 IRS4O14654 1257 aaPredicted RBP15.19■□□□□ 0.02
LETMD1-221ENST00000550100 RTKN2Q8IZC4 609 aa15.19■□□□□ 0.02
LETMD1-221ENST00000550100 ZC3H4Q9UPT8 1303 aaKnown RBP15.18■□□□□ 0.02
LETMD1-221ENST00000550100 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
LETMD1-221ENST00000550100 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
LETMD1-221ENST00000550100 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
LETMD1-221ENST00000550100 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
LETMD1-221ENST00000550100 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
LETMD1-221ENST00000550100 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
LETMD1-221ENST00000550100 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
LETMD1-221ENST00000550100 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
LETMD1-221ENST00000550100 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
LETMD1-221ENST00000550100 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
LETMD1-221ENST00000550100 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
LETMD1-221ENST00000550100 FLIIQ13045 1269 aa15.17■□□□□ 0.02
LETMD1-221ENST00000550100 CWF19L2Q2TBE0 894 aaKnown RBP15.17■□□□□ 0.02
LETMD1-221ENST00000550100 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
LETMD1-221ENST00000550100 PSMD1Q99460 953 aa15.17■□□□□ 0.02
LETMD1-221ENST00000550100 MIER1Q8N108 512 aa15.16■□□□□ 0.02
LETMD1-221ENST00000550100 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
LETMD1-221ENST00000550100 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-221ENST00000550100 BBOX1O75936 387 aa15.15■□□□□ 0.02
LETMD1-221ENST00000550100 TOMM70O94826 608 aa15.15■□□□□ 0.02
LETMD1-221ENST00000550100 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
LETMD1-221ENST00000550100 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-221ENST00000550100 GRAPQ13588 217 aa15.15■□□□□ 0.02
LETMD1-221ENST00000550100 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
LETMD1-221ENST00000550100 SP8Q8IXZ3 490 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms