RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 SERPINB2P05120 415 aa16.13■□□□□ 0.17
TUBA1B-205ENST00000549870 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
TUBA1B-205ENST00000549870 BRCA1P38398 1863 aaKnown RBP16.13■□□□□ 0.17
TUBA1B-205ENST00000549870 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 APLP1P51693 650 aa16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 TEFQ10587 303 aa16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
TUBA1B-205ENST00000549870 TRIM66O15016 1216 aa16.11■□□□□ 0.17
TUBA1B-205ENST00000549870 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
TUBA1B-205ENST00000549870 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
TUBA1B-205ENST00000549870 A0A087WZG4 1122 aa16.1■□□□□ 0.17
TUBA1B-205ENST00000549870 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
TUBA1B-205ENST00000549870 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.1■□□□□ 0.17
TUBA1B-205ENST00000549870 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
TUBA1B-205ENST00000549870 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
TUBA1B-205ENST00000549870 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
TUBA1B-205ENST00000549870 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
TUBA1B-205ENST00000549870 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
TUBA1B-205ENST00000549870 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
TUBA1B-205ENST00000549870 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
TUBA1B-205ENST00000549870 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
TUBA1B-205ENST00000549870 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
TUBA1B-205ENST00000549870 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.16
TUBA1B-205ENST00000549870 RRAGCQ9HB90 399 aa16.08■□□□□ 0.16
TUBA1B-205ENST00000549870 H0YIN7 160 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 RASSF7Q02833 373 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 DNAJC5GQ8N7S2 189 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
TUBA1B-205ENST00000549870 KCNQ3O43525 872 aa16.06■□□□□ 0.16
TUBA1B-205ENST00000549870 A1BGP04217 495 aa16.06■□□□□ 0.16
TUBA1B-205ENST00000549870 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
TUBA1B-205ENST00000549870 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
TUBA1B-205ENST00000549870 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
TUBA1B-205ENST00000549870 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 LMNB1P20700 586 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 FSTL1Q12841 308 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 MAP2K5Q13163 448 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
TUBA1B-205ENST00000549870 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 PRELPP51888 382 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 PDE4DQ08499 809 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 HIC1Q14526 733 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
TUBA1B-205ENST00000549870 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
TUBA1B-205ENST00000549870 PDE6BP35913 854 aa16.03■□□□□ 0.16
TUBA1B-205ENST00000549870 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
TUBA1B-205ENST00000549870 PDZRN3Q9UPQ7 1066 aa16.03■□□□□ 0.16
TUBA1B-205ENST00000549870 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
TUBA1B-205ENST00000549870 GLTPD2A6NH11 291 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 IRF6O14896 467 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 PRR5LQ6MZQ0 368 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
TUBA1B-205ENST00000549870 SBF1O95248 1867 aa16.01■□□□□ 0.15
TUBA1B-205ENST00000549870 NFKBIEO00221 500 aa16.01■□□□□ 0.15
TUBA1B-205ENST00000549870 PPP2R1AP30153 589 aa16.01■□□□□ 0.15
TUBA1B-205ENST00000549870 PTGDRQ13258 359 aa16.01■□□□□ 0.15
TUBA1B-205ENST00000549870 PCDHGA4Q9Y5G9 962 aa16.01■□□□□ 0.15
TUBA1B-205ENST00000549870 VEGFAP15692 232 aaPredicted RBP16■□□□□ 0.15
TUBA1B-205ENST00000549870 FECHP22830 423 aa16■□□□□ 0.15
TUBA1B-205ENST00000549870 HTRA3P83110 453 aa16■□□□□ 0.15
TUBA1B-205ENST00000549870 MCM10Q7L590 875 aa16■□□□□ 0.15
TUBA1B-205ENST00000549870 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
TUBA1B-205ENST00000549870 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
TUBA1B-205ENST00000549870 PRAMEF22A3QJZ6 481 aa15.99■□□□□ 0.15
TUBA1B-205ENST00000549870 C21orf2O43822 256 aa15.99■□□□□ 0.15
TUBA1B-205ENST00000549870 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
TUBA1B-205ENST00000549870 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
TUBA1B-205ENST00000549870 KDM4CQ9H3R0 1056 aa15.99■□□□□ 0.15
TUBA1B-205ENST00000549870 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 NPHP1O15259 732 aa15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 CNBD1Q8NA66 436 aa15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 CCDC102AQ96A19 550 aa15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 EPAS1Q99814 870 aa15.98■□□□□ 0.15
TUBA1B-205ENST00000549870 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 ST5P78524 1137 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 DLEC1Q9Y238 1755 aa15.97■□□□□ 0.15
TUBA1B-205ENST00000549870 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
TUBA1B-205ENST00000549870 SRGNP10124 158 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms