RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 AK9Q5TCS8 1911 aa23.37■■□□□ 1.33
BRF1-215ENST00000549655 CNTROBQ8N137 903 aa23.37■■□□□ 1.33
BRF1-215ENST00000549655 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
BRF1-215ENST00000549655 JCADQ9P266 1359 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 A0A0G2JS52 829 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
BRF1-215ENST00000549655 SPRYD3Q8NCJ5 442 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 C8orf37Q96NL8 207 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 ARXQ96QS3 562 aa23.36■■□□□ 1.33
BRF1-215ENST00000549655 NGLY1Q96IV0 654 aa23.35■■□□□ 1.33
BRF1-215ENST00000549655 MAP3K15Q6ZN16 1313 aa23.35■■□□□ 1.33
BRF1-215ENST00000549655 TRIM28Q13263 835 aaKnown RBP23.34■■□□□ 1.33
BRF1-215ENST00000549655 RABEP1Q15276 862 aa23.34■■□□□ 1.33
BRF1-215ENST00000549655 CCDC8Q9H0W5 538 aaPredicted RBP23.34■■□□□ 1.33
BRF1-215ENST00000549655 CHMP3Q9Y3E7 222 aa23.34■■□□□ 1.33
BRF1-215ENST00000549655 ZBTB1Q9Y2K1 713 aa23.34■■□□□ 1.33
BRF1-215ENST00000549655 CD2BP2O95400 341 aaKnown RBP23.32■■□□□ 1.32
BRF1-215ENST00000549655 NFKBIBQ15653 356 aa23.32■■□□□ 1.32
BRF1-215ENST00000549655 GIGYF2Q6Y7W6 1299 aaKnown RBP23.32■■□□□ 1.32
BRF1-215ENST00000549655 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
BRF1-215ENST00000549655 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
BRF1-215ENST00000549655 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
BRF1-215ENST00000549655 ANO2Q9NQ90 1003 aa23.31■■□□□ 1.32
BRF1-215ENST00000549655 TFCP2Q12800 502 aa23.31■■□□□ 1.32
BRF1-215ENST00000549655 VPS72Q15906 364 aa23.31■■□□□ 1.32
BRF1-215ENST00000549655 HLFQ16534 295 aa23.3■■□□□ 1.32
BRF1-215ENST00000549655 IL25Q9H293 177 aa23.29■■□□□ 1.32
BRF1-215ENST00000549655 IL6STP40189 918 aaPredicted RBP23.29■■□□□ 1.32
BRF1-215ENST00000549655 TNNI3KQ59H18 835 aa23.29■■□□□ 1.32
BRF1-215ENST00000549655 FPGT-TNNI3KV9GXZ4 949 aa23.29■■□□□ 1.32
BRF1-215ENST00000549655 K7ELQ4 463 aaPredicted RBP23.28■■□□□ 1.32
BRF1-215ENST00000549655 PCCAP05165 728 aaPredicted RBP23.28■■□□□ 1.32
BRF1-215ENST00000549655 EVI5LQ96CN4 794 aa23.28■■□□□ 1.32
BRF1-215ENST00000549655 ATP6V1AP38606 617 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 FNBP4Q8N3X1 1017 aaPredicted RBP23.27■■□□□ 1.32
BRF1-215ENST00000549655 ZBTB38Q8NAP3 1195 aaPredicted RBP23.27■■□□□ 1.32
BRF1-215ENST00000549655 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 SGSM2O43147 1006 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 MCCP23508 829 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 SIK1P57059 783 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 FAM89AQ96GI7 184 aa23.27■■□□□ 1.32
BRF1-215ENST00000549655 GPTP24298 496 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
BRF1-215ENST00000549655 ERVV-1B6SEH8 477 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 EPB41L2O43491 1005 aaKnown RBP23.25■■□□□ 1.31
BRF1-215ENST00000549655 KCNQ2O43526 872 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 INTS5Q6P9B9 1019 aaKnown RBP23.25■■□□□ 1.31
BRF1-215ENST00000549655 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
BRF1-215ENST00000549655 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 BOLA2Q9H3K6 86 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 DIAPH3Q9NSV4 1193 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 DBNLQ9UJU6 430 aaKnown RBP23.25■■□□□ 1.31
BRF1-215ENST00000549655 TBC1D2BQ9UPU7 963 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
BRF1-215ENST00000549655 PLA2G12BQ9BX93 195 aa23.24■■□□□ 1.31
BRF1-215ENST00000549655 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
BRF1-215ENST00000549655 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
BRF1-215ENST00000549655 CRKLP46109 303 aaKnown RBP23.23■■□□□ 1.31
BRF1-215ENST00000549655 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
BRF1-215ENST00000549655 EIF5P55010 431 aaKnown RBP23.23■■□□□ 1.31
BRF1-215ENST00000549655 SMARCC1Q92922 1105 aaPredicted RBP23.23■■□□□ 1.31
BRF1-215ENST00000549655 CHMP5Q9NZZ3 219 aa23.23■■□□□ 1.31
BRF1-215ENST00000549655 ANKRD36CQ5JPF3 1778 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 NUP98P52948 1817 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 EYA2O00167 538 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 FRAT2O75474 233 aaPredicted RBP23.22■■□□□ 1.31
BRF1-215ENST00000549655 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
BRF1-215ENST00000549655 ITPK1Q13572 414 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 RUFY2Q8WXA3 655 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 USP21Q9UK80 565 aa23.22■■□□□ 1.31
BRF1-215ENST00000549655 ST18O60284 1047 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 HSP90AA1P07900 732 aaKnown RBP23.21■■□□□ 1.31
BRF1-215ENST00000549655 ANAPC15P60006 121 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 CCDC57Q2TAC2 916 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 PALD1Q9ULE6 856 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 CDHR2Q9BYE9 1310 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 CIAO1O76071 339 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 ATP5JP18859 108 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 LRRC24Q50LG9 513 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 SYNE4Q8N205 404 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 DBNDD2Q9BQY9 259 aa23.21■■□□□ 1.31
BRF1-215ENST00000549655 DDIT3P35638 169 aa23.2■■□□□ 1.3
BRF1-215ENST00000549655 MYT1Q01538 1121 aa23.2■■□□□ 1.3
BRF1-215ENST00000549655 KIAA1211Q6ZU35 1233 aa23.2■■□□□ 1.3
BRF1-215ENST00000549655 LSG1Q9H089 658 aaKnown RBP23.2■■□□□ 1.3
BRF1-215ENST00000549655 RAD50Q92878 1312 aa23.2■■□□□ 1.3
BRF1-215ENST00000549655 CSF1RP07333 972 aa23.2■■□□□ 1.3
BRF1-215ENST00000549655 HSPA4P34932 840 aa23.19■■□□□ 1.3
BRF1-215ENST00000549655 GPR108Q9NPR9 543 aa23.19■■□□□ 1.3
BRF1-215ENST00000549655 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
BRF1-215ENST00000549655 HIP1O00291 1037 aa23.18■■□□□ 1.3
BRF1-215ENST00000549655 IL17RAQ96F46 866 aa23.18■■□□□ 1.3
BRF1-215ENST00000549655 CCDC85AQ96PX6 553 aaPredicted RBP23.18■■□□□ 1.3
BRF1-215ENST00000549655 PUS3Q9BZE2 481 aaKnown RBP23.18■■□□□ 1.3
BRF1-215ENST00000549655 TRMT112Q9UI30 125 aaKnown RBP23.18■■□□□ 1.3
BRF1-215ENST00000549655 ZNF34Q8IZ26 560 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms