RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
GCN1-204ENST00000548132 XAGE3Q8WTP9 111 aa16.31■□□□□ 0.2
GCN1-204ENST00000548132 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
GCN1-204ENST00000548132 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
GCN1-204ENST00000548132 MYH3P11055 1940 aa16.31■□□□□ 0.2
GCN1-204ENST00000548132 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
GCN1-204ENST00000548132 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
GCN1-204ENST00000548132 ZNF646O15015 1829 aaPredicted RBP16.29■□□□□ 0.2
GCN1-204ENST00000548132 APAF1O14727 1248 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 HOXB7P09629 217 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 HTRA3P83110 453 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 SOGA3Q5TF21 947 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
GCN1-204ENST00000548132 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
GCN1-204ENST00000548132 FSTL1Q12841 308 aa16.28■□□□□ 0.2
GCN1-204ENST00000548132 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
GCN1-204ENST00000548132 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
GCN1-204ENST00000548132 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
GCN1-204ENST00000548132 ABCC4O15439 1325 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 APLP1P51693 650 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 PARP10Q53GL7 1025 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 SYNE4Q8N205 404 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
GCN1-204ENST00000548132 PSME4Q14997 1843 aa16.26■□□□□ 0.19
GCN1-204ENST00000548132 DDNO94850 711 aaPredicted RBP16.26■□□□□ 0.19
GCN1-204ENST00000548132 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
GCN1-204ENST00000548132 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
GCN1-204ENST00000548132 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
GCN1-204ENST00000548132 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
GCN1-204ENST00000548132 DUSP27Q5VZP5 1158 aa16.25■□□□□ 0.19
GCN1-204ENST00000548132 PSMD1Q99460 953 aa16.25■□□□□ 0.19
GCN1-204ENST00000548132 CACNA1FO60840 1977 aa16.25■□□□□ 0.19
GCN1-204ENST00000548132 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
GCN1-204ENST00000548132 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
GCN1-204ENST00000548132 IARSP41252 1262 aaKnown RBP16.24■□□□□ 0.19
GCN1-204ENST00000548132 SLC10A5Q5PT55 438 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
GCN1-204ENST00000548132 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 CRAMP1Q96RY5 1269 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
GCN1-204ENST00000548132 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
GCN1-204ENST00000548132 ALDH1B1P30837 517 aa16.23■□□□□ 0.19
GCN1-204ENST00000548132 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
GCN1-204ENST00000548132 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
GCN1-204ENST00000548132 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
GCN1-204ENST00000548132 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
GCN1-204ENST00000548132 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
GCN1-204ENST00000548132 FZD9O00144 591 aa16.22■□□□□ 0.19
GCN1-204ENST00000548132 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
GCN1-204ENST00000548132 RTKN2Q8IZC4 609 aa16.22■□□□□ 0.19
GCN1-204ENST00000548132 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
GCN1-204ENST00000548132 HSP90AB3PQ58FF7 597 aa16.21■□□□□ 0.19
GCN1-204ENST00000548132 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
GCN1-204ENST00000548132 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
GCN1-204ENST00000548132 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
GCN1-204ENST00000548132 GNAI1P63096 354 aa16.2■□□□□ 0.18
GCN1-204ENST00000548132 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
GCN1-204ENST00000548132 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
GCN1-204ENST00000548132 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
GCN1-204ENST00000548132 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
GCN1-204ENST00000548132 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
GCN1-204ENST00000548132 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
GCN1-204ENST00000548132 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 KLRG1Q96E93 195 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
GCN1-204ENST00000548132 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
GCN1-204ENST00000548132 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
GCN1-204ENST00000548132 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
GCN1-204ENST00000548132 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
GCN1-204ENST00000548132 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
GCN1-204ENST00000548132 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
GCN1-204ENST00000548132 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
GCN1-204ENST00000548132 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
GCN1-204ENST00000548132 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
GCN1-204ENST00000548132 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
GCN1-204ENST00000548132 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
GCN1-204ENST00000548132 SCNN1DP51172 638 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
GCN1-204ENST00000548132 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
GCN1-204ENST00000548132 GRAPQ13588 217 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 GPC2Q8N158 579 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
GCN1-204ENST00000548132 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
GCN1-204ENST00000548132 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
GCN1-204ENST00000548132 AOC3Q16853 763 aa16.14■□□□□ 0.17
GCN1-204ENST00000548132 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
GCN1-204ENST00000548132 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
GCN1-204ENST00000548132 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms