RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
C12orf49-202ENST00000547606 NUP98P52948 1817 aa17.03■□□□□ 0.32
C12orf49-202ENST00000547606 ZBED9Q6R2W3 1325 aa17.02■□□□□ 0.32
C12orf49-202ENST00000547606 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
C12orf49-202ENST00000547606 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.31
C12orf49-202ENST00000547606 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
C12orf49-202ENST00000547606 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 PRR5LQ6MZQ0 368 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
C12orf49-202ENST00000547606 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
C12orf49-202ENST00000547606 ST5P78524 1137 aa17■□□□□ 0.31
C12orf49-202ENST00000547606 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 FLIIQ13045 1269 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 ARFGEF2Q9Y6D5 1785 aa16.99■□□□□ 0.31
C12orf49-202ENST00000547606 CHRNA5P30532 468 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
C12orf49-202ENST00000547606 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 MYD88Q99836 296 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
C12orf49-202ENST00000547606 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 KCNA3P22001 575 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
C12orf49-202ENST00000547606 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
C12orf49-202ENST00000547606 NTSR2O95665 410 aa16.96■□□□□ 0.31
C12orf49-202ENST00000547606 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
C12orf49-202ENST00000547606 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
C12orf49-202ENST00000547606 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
C12orf49-202ENST00000547606 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
C12orf49-202ENST00000547606 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
C12orf49-202ENST00000547606 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
C12orf49-202ENST00000547606 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
C12orf49-202ENST00000547606 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
C12orf49-202ENST00000547606 SMC4Q9NTJ3 1288 aa16.95■□□□□ 0.3
C12orf49-202ENST00000547606 IBTKQ9P2D0 1353 aaPredicted RBP16.94■□□□□ 0.3
C12orf49-202ENST00000547606 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
C12orf49-202ENST00000547606 PDE6BP35913 854 aa16.94■□□□□ 0.3
C12orf49-202ENST00000547606 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
C12orf49-202ENST00000547606 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
C12orf49-202ENST00000547606 ANKRD31Q8N7Z5 1873 aa16.94■□□□□ 0.3
C12orf49-202ENST00000547606 DLEC1Q9Y238 1755 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 F6X3S4 739 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 H0YIN7 160 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 DNAAF4Q8WXU2 420 aa16.93■□□□□ 0.3
C12orf49-202ENST00000547606 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
C12orf49-202ENST00000547606 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
C12orf49-202ENST00000547606 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
C12orf49-202ENST00000547606 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
C12orf49-202ENST00000547606 RASSF7Q02833 373 aa16.91■□□□□ 0.3
C12orf49-202ENST00000547606 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
C12orf49-202ENST00000547606 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
C12orf49-202ENST00000547606 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
C12orf49-202ENST00000547606 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
C12orf49-202ENST00000547606 DICER1Q9UPY3 1922 aaKnown RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 FOXN1O15353 648 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 IGKV5-2P06315 115 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 VEGFAP15692 232 aaPredicted RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 CWF19L2Q2TBE0 894 aaKnown RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
C12orf49-202ENST00000547606 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
C12orf49-202ENST00000547606 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
C12orf49-202ENST00000547606 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
C12orf49-202ENST00000547606 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
C12orf49-202ENST00000547606 SRGNP10124 158 aa16.88■□□□□ 0.29
C12orf49-202ENST00000547606 PCDH10Q9P2E7 1040 aa16.88■□□□□ 0.29
C12orf49-202ENST00000547606 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
C12orf49-202ENST00000547606 PTPRCP08575 1304 aa16.88■□□□□ 0.29
C12orf49-202ENST00000547606 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
C12orf49-202ENST00000547606 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
C12orf49-202ENST00000547606 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
C12orf49-202ENST00000547606 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
C12orf49-202ENST00000547606 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
C12orf49-202ENST00000547606 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms