RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
RAB5C-204ENST00000547517 NLRP10Q86W26 655 aa15.21■□□□□ 0.03
RAB5C-204ENST00000547517 MASTLQ96GX5 879 aa15.21■□□□□ 0.03
RAB5C-204ENST00000547517 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
RAB5C-204ENST00000547517 ATP5J2-PTCD1G3V325 749 aa15.2■□□□□ 0.02
RAB5C-204ENST00000547517 NPR1P16066 1061 aa15.2■□□□□ 0.02
RAB5C-204ENST00000547517 PRPF40BQ6NWY9 871 aaKnown RBP15.2■□□□□ 0.02
RAB5C-204ENST00000547517 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-204ENST00000547517 CNKSR1Q969H4 720 aa15.2■□□□□ 0.02
RAB5C-204ENST00000547517 ADCY9O60503 1353 aa15.2■□□□□ 0.02
RAB5C-204ENST00000547517 RNF123Q5XPI4 1314 aa15.19■□□□□ 0.02
RAB5C-204ENST00000547517 KLRG2A4D1S0 409 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-204ENST00000547517 DDX58O95786 925 aaKnown RBP15.19■□□□□ 0.02
RAB5C-204ENST00000547517 RASSF7Q02833 373 aa15.19■□□□□ 0.02
RAB5C-204ENST00000547517 SLX4Q8IY92 1834 aa15.19■□□□□ 0.02
RAB5C-204ENST00000547517 C21orf2O43822 256 aa15.18■□□□□ 0.02
RAB5C-204ENST00000547517 VAMP4O75379 141 aa15.18■□□□□ 0.02
RAB5C-204ENST00000547517 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
RAB5C-204ENST00000547517 MYD88Q99836 296 aa15.18■□□□□ 0.02
RAB5C-204ENST00000547517 ISCA1Q9BUE6 129 aa15.18■□□□□ 0.02
RAB5C-204ENST00000547517 TRMT112Q9UI30 125 aaKnown RBP15.18■□□□□ 0.02
RAB5C-204ENST00000547517 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 CRY2Q49AN0 593 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 G2E3Q7L622 706 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 SYNE4Q8N205 404 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
RAB5C-204ENST00000547517 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
RAB5C-204ENST00000547517 E9PSI1 815 aa15.16■□□□□ 0.02
RAB5C-204ENST00000547517 HCLS1P14317 486 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-204ENST00000547517 LAMB2P55268 1798 aa15.16■□□□□ 0.02
RAB5C-204ENST00000547517 DDX60Q8IY21 1712 aaKnown RBP15.15■□□□□ 0.02
RAB5C-204ENST00000547517 PI4KAP2A4QPH2 592 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 NFKBIEO00221 500 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 FLIIQ13045 1269 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-204ENST00000547517 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 PI4KAP1Q8N8J0 262 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-204ENST00000547517 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
RAB5C-204ENST00000547517 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
RAB5C-204ENST00000547517 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
RAB5C-204ENST00000547517 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
RAB5C-204ENST00000547517 ZNF526Q8TF50 670 aaPredicted RBP15.14■□□□□ 0.01
RAB5C-204ENST00000547517 FAM89AQ96GI7 184 aa15.14■□□□□ 0.01
RAB5C-204ENST00000547517 CDCA7LQ96GN5 454 aa15.14■□□□□ 0.01
RAB5C-204ENST00000547517 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
RAB5C-204ENST00000547517 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
RAB5C-204ENST00000547517 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
RAB5C-204ENST00000547517 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
RAB5C-204ENST00000547517 CCDC93Q567U6 631 aa15.13■□□□□ 0.01
RAB5C-204ENST00000547517 SOGA3Q5TF21 947 aa15.13■□□□□ 0.01
RAB5C-204ENST00000547517 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
RAB5C-204ENST00000547517 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
RAB5C-204ENST00000547517 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
RAB5C-204ENST00000547517 SBF1O95248 1867 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 LMNB1P20700 586 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-204ENST00000547517 PRELPP51888 382 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 CCDC191Q8NCU4 936 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 TAOK3Q9H2K8 898 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
RAB5C-204ENST00000547517 IRS4O14654 1257 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-204ENST00000547517 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-204ENST00000547517 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-204ENST00000547517 C7orf43Q8WVR3 580 aa15.11■□□□□ 0.01
RAB5C-204ENST00000547517 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
RAB5C-204ENST00000547517 ABCC4O15439 1325 aa15.11■□□□□ 0.01
RAB5C-204ENST00000547517 IGKV5-2P06315 115 aa15.1■□□□□ 0.01
RAB5C-204ENST00000547517 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
RAB5C-204ENST00000547517 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
RAB5C-204ENST00000547517 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
RAB5C-204ENST00000547517 JARID2Q92833 1246 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-204ENST00000547517 GPBP1L1Q9HC44 474 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-204ENST00000547517 LTBP3Q9NS15 1303 aa15.1■□□□□ 0.01
RAB5C-204ENST00000547517 NEURL1BA8MQ27 555 aa15.09■□□□□ 0.01
RAB5C-204ENST00000547517 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-204ENST00000547517 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
RAB5C-204ENST00000547517 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
RAB5C-204ENST00000547517 F6X3S4 739 aa15.08■□□□□ 0
RAB5C-204ENST00000547517 DDX46Q7L014 1031 aaKnown RBP15.08■□□□□ 0
RAB5C-204ENST00000547517 SNED1Q8TER0 1413 aa15.08■□□□□ 0
RAB5C-204ENST00000547517 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
RAB5C-204ENST00000547517 GRAPQ13588 217 aa15.07■□□□□ 0
RAB5C-204ENST00000547517 RTKN2Q8IZC4 609 aa15.07■□□□□ 0
RAB5C-204ENST00000547517 GRAPLQ8TC17 118 aaPredicted RBP15.07■□□□□ 0
RAB5C-204ENST00000547517 BCL2L13Q9BXK5 485 aa15.07■□□□□ 0
RAB5C-204ENST00000547517 COL4A1P02462 1669 aa15.06■□□□□ 0
RAB5C-204ENST00000547517 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
RAB5C-204ENST00000547517 SF3B3Q15393 1217 aaKnown RBP15.06■□□□□ 0
RAB5C-204ENST00000547517 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
RAB5C-204ENST00000547517 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
RAB5C-204ENST00000547517 CDHR2Q9BYE9 1310 aa15.06■□□□□ 0
RAB5C-204ENST00000547517 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
RAB5C-204ENST00000547517 TAF1P21675 1872 aa15.06■□□□□ 0
RAB5C-204ENST00000547517 PDE8AO60658 829 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 C1QTNF8P60827 252 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms